Britta Velten
| Snapshot Date: 2024-06-12 14:00 -0400 (Wed, 12 Jun 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: RELEASE_3_19 |
| git_last_commit: a4dfa52 |
| git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.19: simplified long |
|
This page was generated on 2024-06-14 14:38 -0400 (Fri, 14 Jun 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4757 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.4.0 (2024-04-24 ucrt) -- "Puppy Cup" | 4491 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 908/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.20.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.20.0 |
| Command: F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:graper.install-out.txt --library=F:\biocbuild\bbs-3.19-bioc\R\library --no-vignettes --timings graper_1.20.0.tar.gz |
| StartedAt: 2024-06-13 04:39:06 -0400 (Thu, 13 Jun 2024) |
| EndedAt: 2024-06-13 04:42:31 -0400 (Thu, 13 Jun 2024) |
| EllapsedTime: 204.9 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:graper.install-out.txt --library=F:\biocbuild\bbs-3.19-bioc\R\library --no-vignettes --timings graper_1.20.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory 'F:/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck'
* using R version 4.4.0 (2024-04-24 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
gcc.exe (GCC) 13.2.0
GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'graper/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'graper' version '1.20.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'graper' can be installed ... OK
* used C++ compiler: 'G__~1.EXE (GCC) 13.2.0'
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files for x64 is not available
File 'F:/biocbuild/bbs-3.19-bioc/R/library/graper/libs/x64/graper.dll':
Found '_exit', possibly from '_exit' (C)
Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
Found 'exit', possibly from 'exit' (C), 'stop' (Fortran)
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf. The detected symbols are linked into
the code but might come from libraries and not actually be called.
See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
Running 'testthat.R'
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 3 NOTEs
See
'F:/biocbuild/bbs-3.19-bioc/meat/graper.Rcheck/00check.log'
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library 'F:/biocbuild/bbs-3.19-bioc/R/library'
* installing *source* package 'graper' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 13.2.0'
using C++11
g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/RcppArmadillo/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/BH/include' -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/RcppArmadillo/include' -I'F:/biocbuild/bbs-3.19-bioc/R/library/BH/include' -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c fit_graper.cpp -o fit_graper.o
In file included from F:/biocbuild/bbs-3.19-bioc/R/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
from F:/biocbuild/bbs-3.19-bioc/R/library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
from F:/biocbuild/bbs-3.19-bioc/R/library/BH/include/boost/math/special_functions/digamma.hpp:15,
from graper_linear_dense_ff.h:2,
from fit_graper.cpp:4:
F:/biocbuild/bbs-3.19-bioc/R/library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
| ^~~~~~~
g++ -shared -s -static-libgcc -o graper.dll tmp.def RcppExports.o fit_graper.o -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lRlapack -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.19-bioc/R/library/00LOCK-graper/00new/graper/libs/x64
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.0 (2024-04-24 ucrt) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-828.988
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-572.595
ELB improved by 256.393
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-512.824
ELB improved by 59.7709
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.849
ELB improved by 41.9746
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.526
ELB improved by 18.3234
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.559
ELB improved by 6.96716
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.588
ELB improved by 3.97057
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.388
ELB improved by 3.19999
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.306
ELB improved by 3.08213
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.08
ELB improved by 3.22561
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.626
ELB improved by 3.45473
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.031
ELB improved by 3.59452
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.563
ELB improved by 3.46772
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.561
ELB improved by 3.00249
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.255
ELB improved by 2.30563
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.652
ELB improved by 1.60322
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.587
ELB improved by 1.06505
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.867
ELB improved by 0.720313
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.347
ELB improved by 0.519728
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.94
ELB improved by 0.407158
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.596
ELB improved by 0.343513
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.291
ELB improved by 0.305459
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.011
ELB improved by 0.279986
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.75
ELB improved by 0.260886
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.504
ELB improved by 0.246289
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.268
ELB improved by 0.236146
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.037
ELB improved by 0.230437
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.808
ELB improved by 0.228745
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.578
ELB improved by 0.230509
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.343
ELB improved by 0.235223
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.1
ELB improved by 0.242339
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.849
ELB improved by 0.25097
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.59
ELB improved by 0.259627
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.323
ELB improved by 0.266382
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.054
ELB improved by 0.269606
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.785
ELB improved by 0.268695
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.521
ELB improved by 0.264082
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.264
ELB improved by 0.25668
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.017
ELB improved by 0.247414
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.78
ELB improved by 0.237061
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.554
ELB improved by 0.226235
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.338
ELB improved by 0.215398
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.133
ELB improved by 0.204874
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.938
ELB improved by 0.194863
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.753
ELB improved by 0.18547
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.576
ELB improved by 0.176728
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.408
ELB improved by 0.168629
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.246
ELB improved by 0.16114
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.092
ELB improved by 0.154219
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.944
ELB improved by 0.147818
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.803
ELB improved by 0.141887
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.666
ELB improved by 0.136363
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.535
ELB improved by 0.131165
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.409
ELB improved by 0.126181
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.288
ELB improved by 0.121262
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.171
ELB improved by 0.116234
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.06
ELB improved by 0.11092
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.955
ELB improved by 0.105178
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.856
ELB improved by 0.0989475
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.764
ELB improved by 0.0922739
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.679
ELB improved by 0.0853154
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.6
ELB improved by 0.0783215
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.529
ELB improved by 0.0716019
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.463
ELB improved by 0.0655029
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.403
ELB improved by 0.0604122
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.346
ELB improved by 0.0568161
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.291
ELB improved by 0.0554533
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.233
ELB improved by 0.0576756
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.167
ELB improved by 0.0662834
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.079
ELB improved by 0.0874248
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.945
ELB improved by 0.134046
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.72
ELB improved by 0.225373
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.367
ELB improved by 0.352963
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.938
ELB improved by 0.42932
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.534
ELB improved by 0.403084
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.206
ELB improved by 0.328449
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.958
ELB improved by 0.248139
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.779
ELB improved by 0.178738
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.653
ELB improved by 0.126129
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.563
ELB improved by 0.0895631
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.498
ELB improved by 0.0654043
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.448
ELB improved by 0.0497607
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.409
ELB improved by 0.0395761
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.376
ELB improved by 0.0327877
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.348
ELB improved by 0.0281157
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.323
ELB improved by 0.0247999
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.301
ELB improved by 0.0223986
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.28
ELB improved by 0.0206579
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.26
ELB improved by 0.0194348
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.242
ELB improved by 0.0186515
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.224
ELB improved by 0.0182693
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.205
ELB improved by 0.0182698
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.187
ELB improved by 0.0186404
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.167
ELB improved by 0.0193576
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.147
ELB improved by 0.0203696
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.125
ELB improved by 0.0215771
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.103
ELB improved by 0.0228212
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.079
ELB improved by 0.0238883
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.054
ELB improved by 0.0245416
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.03
ELB improved by 0.0245809
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.006
ELB improved by 0.0239093
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.983
ELB improved by 0.0225725
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.962
ELB improved by 0.0207436
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.944
ELB improved by 0.01866
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.927
ELB improved by 0.0165487
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.913
ELB improved by 0.0145759
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.9
ELB improved by 0.0128335
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.888
ELB improved by 0.0113512
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.878
ELB improved by 0.0101189
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.869
ELB improved by 0.00910649
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-858.112
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-582.607
ELB improved by 275.505
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.451
ELB improved by 61.1563
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-479.868
ELB improved by 41.5823
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.887
ELB improved by 18.9815
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.988
ELB improved by 7.89843
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.369
ELB improved by 4.61932
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.654
ELB improved by 3.71473
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.037
ELB improved by 3.61751
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.07
ELB improved by 3.96732
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.338
ELB improved by 4.73161
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.432
ELB improved by 5.90622
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.304
ELB improved by 7.12758
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.991
ELB improved by 7.31296
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.261
ELB improved by 5.7306
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.715
ELB improved by 3.54564
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.698
ELB improved by 2.01725
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.473
ELB improved by 1.22509
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.629
ELB improved by 0.843793
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.003
ELB improved by 0.625787
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.54
ELB improved by 0.46312
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.193
ELB improved by 0.347154
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.916
ELB improved by 0.27709
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.679
ELB improved by 0.236845
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.466
ELB improved by 0.212842
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.268
ELB improved by 0.197822
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.08
ELB improved by 0.187697
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.901
ELB improved by 0.179382
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.731
ELB improved by 0.170547
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.57
ELB improved by 0.16051
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.42
ELB improved by 0.150503
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.277
ELB improved by 0.142583
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.138
ELB improved by 0.138709
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.997
ELB improved by 0.141139
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.843
ELB improved by 0.153913
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.658
ELB improved by 0.184877
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.413
ELB improved by 0.245503
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.078
ELB improved by 0.33517
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.674
ELB improved by 0.403586
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.287
ELB improved by 0.386908
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.969
ELB improved by 0.318123
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.713
ELB improved by 0.256331
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.5
ELB improved by 0.212692
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.319
ELB improved by 0.181308
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.161
ELB improved by 0.157426
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.023
ELB improved by 0.138472
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.9
ELB improved by 0.122997
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.79
ELB improved by 0.110095
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.691
ELB improved by 0.0991558
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.601
ELB improved by 0.0897511
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.519
ELB improved by 0.0815715
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.445
ELB improved by 0.0743899
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.377
ELB improved by 0.0680362
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.314
ELB improved by 0.0623803
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.257
ELB improved by 0.0573198
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.204
ELB improved by 0.0527708
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.156
ELB improved by 0.0486628
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.111
ELB improved by 0.0449345
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.069
ELB improved by 0.0415328
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.031
ELB improved by 0.0384123
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.995
ELB improved by 0.0355357
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.962
ELB improved by 0.0328744
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.932
ELB improved by 0.030408
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.904
ELB improved by 0.0281235
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.878
ELB improved by 0.0260126
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.854
ELB improved by 0.0240697
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.831
ELB improved by 0.0222892
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.811
ELB improved by 0.0206648
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.792
ELB improved by 0.0191882
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.774
ELB improved by 0.0178496
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.757
ELB improved by 0.0166383
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.742
ELB improved by 0.0155432
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.727
ELB improved by 0.0145535
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.713
ELB improved by 0.013659
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.701
ELB improved by 0.0128504
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.688
ELB improved by 0.0121194
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.677
ELB improved by 0.0114588
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.666
ELB improved by 0.0108624
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.656
ELB improved by 0.0103245
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.646
ELB improved by 0.00984081
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-841.891
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-575.237
ELB improved by 266.654
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-513.575
ELB improved by 61.6622
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.647
ELB improved by 41.9279
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.077
ELB improved by 19.5697
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.776
ELB improved by 8.3016
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.41
ELB improved by 4.36624
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.055
ELB improved by 3.35471
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.928
ELB improved by 3.12685
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.77
ELB improved by 3.15755
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.47
ELB improved by 3.30066
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.984
ELB improved by 3.48576
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.336
ELB improved by 3.64766
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.648
ELB improved by 3.68799
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.154
ELB improved by 3.49418
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.11
ELB improved by 3.04448
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.677
ELB improved by 2.43296
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.893
ELB improved by 1.78404
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.619
ELB improved by 1.27419
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.642
ELB improved by 0.976357
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.812
ELB improved by 0.829917
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.042
ELB improved by 0.769985
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.287
ELB improved by 0.754962
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.532
ELB improved by 0.754903
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.781
ELB improved by 0.751893
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.033
ELB improved by 0.74707
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.284
ELB improved by 0.749008
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.524
ELB improved by 0.760553
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.744
ELB improved by 0.779781
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.941
ELB improved by 0.802848
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.117
ELB improved by 0.824269
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.28
ELB improved by 0.837283
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.444
ELB improved by 0.835684
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.627
ELB improved by 0.816727
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.844
ELB improved by 0.783234
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.104
ELB improved by 0.739948
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.424
ELB improved by 0.680353
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.834
ELB improved by 0.59017
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.351
ELB improved by 0.482916
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.963
ELB improved by 0.387954
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.648
ELB improved by 0.315168
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.388
ELB improved by 0.259277
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.176
ELB improved by 0.212198
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.007
ELB improved by 0.169292
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.876
ELB improved by 0.130996
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.776
ELB improved by 0.0996378
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.7
ELB improved by 0.0759125
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.642
ELB improved by 0.0586602
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.595
ELB improved by 0.0461867
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.558
ELB improved by 0.0370593
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.528
ELB improved by 0.0302577
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.503
ELB improved by 0.0250915
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.482
ELB improved by 0.0210967
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.464
ELB improved by 0.0179577
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.448
ELB improved by 0.0154561
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.435
ELB improved by 0.0134377
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.423
ELB improved by 0.0117916
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.413
ELB improved by 0.0104361
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.404
ELB improved by 0.00931032
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-876.066
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.423
ELB improved by 305.642
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.127
ELB improved by 60.2962
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.328
ELB improved by 35.7994
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.092
ELB improved by 14.2358
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.724
ELB improved by 6.36791
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.352
ELB improved by 4.37226
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.424
ELB improved by 3.92826
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.462
ELB improved by 3.96187
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.256
ELB improved by 4.20517
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.73
ELB improved by 4.5263
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.96
ELB improved by 4.7698
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.213
ELB improved by 4.7473
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.953
ELB improved by 4.26058
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.706
ELB improved by 3.24651
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.582
ELB improved by 2.12416
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.279
ELB improved by 1.30268
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.461
ELB improved by 0.818558
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.906
ELB improved by 0.554844
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.497
ELB improved by 0.409077
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.174
ELB improved by 0.322739
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.907
ELB improved by 0.266926
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.679
ELB improved by 0.227863
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.48
ELB improved by 0.198814
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.304
ELB improved by 0.176268
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.146
ELB improved by 0.158245
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.002
ELB improved by 0.143529
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.871
ELB improved by 0.131321
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.75
ELB improved by 0.121063
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.638
ELB improved by 0.112349
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.533
ELB improved by 0.104873
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.434
ELB improved by 0.0983984
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.342
ELB improved by 0.0927402
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.254
ELB improved by 0.0877505
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.17
ELB improved by 0.0833107
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.091
ELB improved by 0.0793249
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.015
ELB improved by 0.0757155
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.943
ELB improved by 0.0724201
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.874
ELB improved by 0.0693886
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.807
ELB improved by 0.0665814
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.743
ELB improved by 0.0639678
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.682
ELB improved by 0.0615247
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.622
ELB improved by 0.0592354
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.565
ELB improved by 0.0570886
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.51
ELB improved by 0.0550778
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.457
ELB improved by 0.0531998
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.406
ELB improved by 0.0514549
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.356
ELB improved by 0.0498454
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.307
ELB improved by 0.0483755
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.26
ELB improved by 0.0470507
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.214
ELB improved by 0.0458774
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.169
ELB improved by 0.0448624
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.125
ELB improved by 0.0440125
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.082
ELB improved by 0.0433348
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.039
ELB improved by 0.0428355
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.997
ELB improved by 0.0425204
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.954
ELB improved by 0.0423947
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.912
ELB improved by 0.0424621
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.869
ELB improved by 0.0427257
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.826
ELB improved by 0.0431873
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.782
ELB improved by 0.0438482
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.737
ELB improved by 0.0447095
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.692
ELB improved by 0.0457726
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.645
ELB improved by 0.04704
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.596
ELB improved by 0.0485161
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.546
ELB improved by 0.0502068
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.494
ELB improved by 0.0521202
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.44
ELB improved by 0.0542651
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.383
ELB improved by 0.0566506
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.324
ELB improved by 0.0592847
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.261
ELB improved by 0.0621731
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.196
ELB improved by 0.0653179
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.127
ELB improved by 0.0687168
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.055
ELB improved by 0.0723625
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.979
ELB improved by 0.0762428
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.898
ELB improved by 0.0803415
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.814
ELB improved by 0.0846416
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.725
ELB improved by 0.0891305
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.631
ELB improved by 0.0938096
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.532
ELB improved by 0.0987122
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.428
ELB improved by 0.103932
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.319
ELB improved by 0.109675
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.202
ELB improved by 0.116347
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.077
ELB improved by 0.124715
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.941
ELB improved by 0.136164
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.788
ELB improved by 0.153063
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.609
ELB improved by 0.17883
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.394
ELB improved by 0.215849
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.136
ELB improved by 0.257316
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.858
ELB improved by 0.278121
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.604
ELB improved by 0.254404
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.406
ELB improved by 0.198092
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.266
ELB improved by 0.139385
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.172
ELB improved by 0.0946828
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.106
ELB improved by 0.0651782
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.06
ELB improved by 0.0465985
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.025
ELB improved by 0.0348108
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.998
ELB improved by 0.0270763
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.976
ELB improved by 0.02178
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.958
ELB improved by 0.0179971
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.943
ELB improved by 0.0151916
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.93
ELB improved by 0.0130434
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.919
ELB improved by 0.0113528
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.909
ELB improved by 0.00999103
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.26 3.81 6.71
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.06 | 0.00 | 0.06 | |
| getPIPs | 0.06 | 0.00 | 0.06 | |
| graper | 0.07 | 0.03 | 0.10 | |
| makeExampleData | 0.00 | 0.01 | 0.01 | |
| makeExampleDataWithUnequalGroups | 0.01 | 0.00 | 0.02 | |
| plotELBO | 0.21 | 0.07 | 0.26 | |
| plotGroupPenalties | 1.03 | 0.07 | 1.13 | |
| plotPosterior | 0.53 | 0.02 | 0.55 | |
| predict.graper | 1.94 | 0.03 | 1.97 | |
| print.graper | 0.06 | 0.00 | 0.06 | |