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This page was generated on 2024-05-22 11:36:13 -0400 (Wed, 22 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4751
palomino3Windows Server 2022 Datacenterx644.4.0 (2024-04-24 ucrt) -- "Puppy Cup" 4485
lconwaymacOS 12.7.1 Montereyx86_644.4.0 (2024-04-24) -- "Puppy Cup" 3444
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1989/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SingleCellAlleleExperiment 1.0.0  (landing page)
Jonas Schuck
Snapshot Date: 2024-05-21 14:00:15 -0400 (Tue, 21 May 2024)
git_url: https://git.bioconductor.org/packages/SingleCellAlleleExperiment
git_branch: RELEASE_3_19
git_last_commit: 46535f8
git_last_commit_date: 2024-04-30 11:56:29 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.7.1 Monterey / x86_64  ERROR    ERROR  skippedskipped
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here

BUILD results for SingleCellAlleleExperiment on palomino3


To the developers/maintainers of the SingleCellAlleleExperiment package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SingleCellAlleleExperiment.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: SingleCellAlleleExperiment
Version: 1.0.0
Command: chmod a+r SingleCellAlleleExperiment -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data SingleCellAlleleExperiment
StartedAt: 2024-05-21 22:05:58 -0400 (Tue, 21 May 2024)
EndedAt: 2024-05-21 22:06:54 -0400 (Tue, 21 May 2024)
EllapsedTime: 55.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   chmod a+r SingleCellAlleleExperiment -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data SingleCellAlleleExperiment
###
##############################################################################
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* checking for file 'SingleCellAlleleExperiment/DESCRIPTION' ... OK
* preparing 'SingleCellAlleleExperiment':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'scae_intro.Rmd' using rmarkdown

Quitting from lines 229-238 [unnamed-chunk-8] (scae_intro.Rmd)
Error: processing vignette 'scae_intro.Rmd' failed with diagnostics:
BiocParallel errors
  1 remote errors, element index: 1
  0 unevaluated and other errors
  first remote error:
Error in file(file, "rt"): cannot open the connection

--- failed re-building 'scae_intro.Rmd'

SUMMARY: processing the following file failed:
  'scae_intro.Rmd'

Error: Vignette re-building failed.
Execution halted