| Back to Multiple platform build/check report for BioC 3.19: simplified long |
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This page was generated on 2024-07-24 09:07 -0400 (Wed, 24 Jul 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4747 |
| palomino7 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4489 |
| merida1 | macOS 12.7.5 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4518 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4467 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1472/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| OncoSimulR 4.6.0 (landing page) Ramon Diaz-Uriarte
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| palomino7 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.5 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
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To the developers/maintainers of the OncoSimulR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/OncoSimulR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: OncoSimulR |
| Version: 4.6.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data OncoSimulR |
| StartedAt: 2024-07-22 04:53:11 -0400 (Mon, 22 Jul 2024) |
| EndedAt: 2024-07-22 04:57:13 -0400 (Mon, 22 Jul 2024) |
| EllapsedTime: 242.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data OncoSimulR ### ############################################################################## ############################################################################## * checking for file ‘OncoSimulR/DESCRIPTION’ ... OK * preparing ‘OncoSimulR’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘OncoSimulR.Rmd’ using rmarkdown 2024-07-22 04:55:18.871 R[60493:155784899] XType: Using static font registry. Warning: ggrepel: 12 unlabeled data points (too many overlaps). Consider increasing max.overlaps Warning: ggrepel: 103 unlabeled data points (too many overlaps). Consider increasing max.overlaps Warning: ggrepel: 7 unlabeled data points (too many overlaps). Consider increasing max.overlaps Warning: ggrepel: 20 unlabeled data points (too many overlaps). Consider increasing max.overlaps Quitting from lines 12446-12466 [exampleConst] (OncoSimulR.Rmd) Error: processing vignette 'OncoSimulR.Rmd' failed with diagnostics: An unrecoverable exception happened in the simulation of the input object.Empty object with nothing to plot. --- failed re-building ‘OncoSimulR.Rmd’ SUMMARY: processing the following file failed: ‘OncoSimulR.Rmd’ Error: Vignette re-building failed. Execution halted