Back to Multiple platform build/check report for BioC 3.19: simplified long |
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This page was generated on 2024-06-14 14:38 -0400 (Fri, 14 Jun 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4757 |
palomino3 | Windows Server 2022 Datacenter | x64 | 4.4.0 (2024-04-24 ucrt) -- "Puppy Cup" | 4491 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 255/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
BUS 1.60.0 (landing page) Yuanhua Liu
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||||
palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | ![]() | ||||||||
To the developers/maintainers of the BUS package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BUS.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: BUS |
Version: 1.60.0 |
Command: F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL BUS |
StartedAt: 2024-06-12 16:52:21 -0400 (Wed, 12 Jun 2024) |
EndedAt: 2024-06-12 16:52:34 -0400 (Wed, 12 Jun 2024) |
EllapsedTime: 12.9 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL BUS ### ############################################################################## ############################################################################## * installing to library 'F:/biocbuild/bbs-3.19-bioc/R/library' * installing *source* package 'BUS' ... ** using staged installation ** libs using C++ compiler: 'G__~1.EXE (GCC) 13.2.0' g++ -std=gnu++17 -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c BUS.cpp -o BUS.o BUS.cpp: In function 'SEXPREC* MINempirical(SEXP, SEXP, SEXP, SEXP, SEXP)': BUS.cpp:22:7: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 22 | for( int i=0; i<*ncols1; ++i ) | ^~~ In file included from F:/biocbuild/bbs-3.19-bioc/R/include/Rdefines.h:41, from BUS.h:9, from BUS.cpp:1: F:/biocbuild/bbs-3.19-bioc/R/include/Rinternals.h:372:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 372 | #define UNPROTECT(n) Rf_unprotect(n) | ^~~~~~~~~~~~ BUS.cpp:27:10: note: in expansion of macro 'UNPROTECT' 27 | UNPROTECT(6); | ^~~~~~~~~ g++ -std=gnu++17 -shared -s -static-libgcc -o BUS.dll tmp.def BUS.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.19-bioc/R/library/00LOCK-BUS/00new/BUS/libs/x64 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BUS)