Arkadiusz Gladki
| Snapshot Date: 2024-06-26 14:00 -0400 (Wed, 26 Jun 2024) |
| git_url: https://git.bioconductor.org/packages/gDRcore |
| git_branch: devel |
| git_last_commit: 72d118b |
| git_last_commit_date: 2024-06-05 07:50:40 -0400 (Wed, 05 Jun 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-06-27 11:38 -0400 (Thu, 27 Jun 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" | 4691 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 RC (2024-06-06 r86719) -- "Race for Your Life" | 4405 |
| kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 RC (2024-06-06 r86719) -- "Race for Your Life" | 4354 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 763/2243 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| gDRcore 1.3.2 (landing page) Arkadiusz Gladki
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | ERROR | skipped | skipped | |||||||||
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To the developers/maintainers of the gDRcore package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gDRcore.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: gDRcore |
| Version: 1.3.2 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data gDRcore |
| StartedAt: 2024-06-26 16:41:05 -0400 (Wed, 26 Jun 2024) |
| EndedAt: 2024-06-26 16:41:35 -0400 (Wed, 26 Jun 2024) |
| EllapsedTime: 29.4 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data gDRcore ### ############################################################################## ############################################################################## * checking for file ‘gDRcore/DESCRIPTION’ ... OK * preparing ‘gDRcore’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘gDR-annotation.Rmd’ using rmarkdown --- finished re-building ‘gDR-annotation.Rmd’ --- re-building ‘gDR-data-model.Rmd’ using rmarkdown --- finished re-building ‘gDR-data-model.Rmd’ --- re-building ‘gDRcore.Rmd’ using rmarkdown Quitting from lines 76-86 [unnamed-chunk-3] (gDRcore.Rmd) Error: processing vignette 'gDRcore.Rmd' failed with diagnostics: There were errors reading the manifest file. Please see the logs: Error in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/readxl/libs/readxl.so': dlopen(/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/readxl/libs/readxl.so, 0x0006): Symbol not found: (_iconv) Referenced from: '/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/readxl/libs/readxl.so' Expected in: '/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/lib/libR.dylib' --- failed re-building ‘gDRcore.Rmd’ SUMMARY: processing the following file failed: ‘gDRcore.Rmd’ Error: Vignette re-building failed. Execution halted