Devon Kohler
| Snapshot Date: 2024-06-27 14:00 -0400 (Thu, 27 Jun 2024) |
| git_url: https://git.bioconductor.org/packages/MSstatsShiny |
| git_branch: devel |
| git_last_commit: d331a9a |
| git_last_commit_date: 2024-06-01 12:18:06 -0400 (Sat, 01 Jun 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-06-28 11:39 -0400 (Fri, 28 Jun 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" | 4693 |
| palomino6 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4089 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 RC (2024-06-06 r86719) -- "Race for Your Life" | 4407 |
| kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 RC (2024-06-06 r86719) -- "Race for Your Life" | 4356 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1333/2243 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MSstatsShiny 1.7.2 (landing page) Devon Kohler
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino6 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | ERROR | ERROR | skipped | skipped | |||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | see weekly results here | ||||||||||||
|
To the developers/maintainers of the MSstatsShiny package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MSstatsShiny.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: MSstatsShiny |
| Version: 1.7.2 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MSstatsShiny |
| StartedAt: 2024-06-27 17:23:03 -0400 (Thu, 27 Jun 2024) |
| EndedAt: 2024-06-27 17:23:13 -0400 (Thu, 27 Jun 2024) |
| EllapsedTime: 10.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MSstatsShiny
###
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* checking for file ‘MSstatsShiny/DESCRIPTION’ ... OK
* preparing ‘MSstatsShiny’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
-----------------------------------
* installing *source* package ‘MSstatsShiny’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘MSstats::SkylinetoMSstatsFormat’ by ‘MSstatsConvert::SkylinetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::ProgenesistoMSstatsFormat’ by ‘MSstatsConvert::ProgenesistoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::SpectronauttoMSstatsFormat’ by ‘MSstatsConvert::SpectronauttoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::FragPipetoMSstatsFormat’ by ‘MSstatsConvert::FragPipetoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::DIAUmpiretoMSstatsFormat’ by ‘MSstatsConvert::DIAUmpiretoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenMStoMSstatsFormat’ by ‘MSstatsConvert::OpenMStoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::MaxQtoMSstatsFormat’ by ‘MSstatsConvert::MaxQtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::PDtoMSstatsFormat’ by ‘MSstatsConvert::PDtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::OpenSWATHtoMSstatsFormat’ by ‘MSstatsConvert::OpenSWATHtoMSstatsFormat’ when loading ‘MSstatsShiny’
Warning: replacing previous import ‘MSstats::DIANNtoMSstatsFormat’ by ‘MSstatsConvert::DIANNtoMSstatsFormat’ when loading ‘MSstatsShiny’
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/readxl/libs/readxl.so':
dlopen(/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/readxl/libs/readxl.so, 0x0006): Symbol not found: (_iconv)
Referenced from: '/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/readxl/libs/readxl.so'
Expected in: '/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/lib/libR.dylib'
Calls: <Anonymous> ... asNamespace -> loadNamespace -> library.dynam -> dyn.load
Execution halted
ERROR: lazy loading failed for package ‘MSstatsShiny’
* removing ‘/private/tmp/RtmpHymgyN/Rinst380e1bcb2a9c/MSstatsShiny’
-----------------------------------
ERROR: package installation failed