Back to Multiple platform build/check report for BioC 3.20: simplified long |
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This page was generated on 2024-05-31 19:30:07 -0400 (Fri, 31 May 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" | 4669 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup" | 4404 |
merida1 | macOS 12.7.4 Monterey | x86_64 | 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" | 4431 |
kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" | 4384 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 957/2233 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.11.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 12.7.4 Monterey / x86_64 | OK | OK | ERROR | OK | |||||||||
kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | |||||||||
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: HPiP |
Version: 1.11.0 |
Command: F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:HPiP.install-out.txt --library=F:\biocbuild\bbs-3.20-bioc\R\library --no-vignettes --timings HPiP_1.11.0.tar.gz |
StartedAt: 2024-05-31 07:25:43 -0400 (Fri, 31 May 2024) |
EndedAt: 2024-05-31 07:30:31 -0400 (Fri, 31 May 2024) |
EllapsedTime: 288.4 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:HPiP.install-out.txt --library=F:\biocbuild\bbs-3.20-bioc\R\library --no-vignettes --timings HPiP_1.11.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'F:/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck' * using R version 4.4.0 RC (2024-04-16 r86468 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * using option '--no-vignettes' * checking for file 'HPiP/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'HPiP' version '1.11.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'HPiP' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... NOTE License stub is invalid DCF. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) getHPI.Rd:29: Lost braces 29 | then the Kronecker product is the code{(pm × qn)} block matrix | ^ * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: 'ftrCOOL' * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in 'vignettes' ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed FSmethod 31.99 1.67 33.78 var_imp 31.70 1.59 33.29 corr_plot 31.84 1.35 33.19 pred_ensembel 13.85 0.67 10.82 enrichfindP 0.52 0.14 12.65 * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'runTests.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 3 NOTEs See 'F:/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck/00check.log' for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library 'F:/biocbuild/bbs-3.20-bioc/R/library' * installing *source* package 'HPiP' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 95.483500 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 102.821054 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 100.485006 iter 10 value 85.442012 iter 20 value 82.427184 iter 30 value 82.405230 iter 40 value 82.405145 final value 82.405134 converged Fitting Repeat 4 # weights: 103 initial value 95.695417 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 111.049788 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 95.543368 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 96.659531 final value 94.026542 converged Fitting Repeat 3 # weights: 305 initial value 98.089494 iter 10 value 92.651583 iter 20 value 92.550994 final value 92.550731 converged Fitting Repeat 4 # weights: 305 initial value 95.164111 final value 94.026542 converged Fitting Repeat 5 # weights: 305 initial value 102.103551 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 97.828438 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 98.678523 iter 10 value 93.148408 iter 20 value 93.111871 iter 30 value 91.121003 iter 40 value 91.068398 iter 40 value 91.068398 iter 40 value 91.068398 final value 91.068398 converged Fitting Repeat 3 # weights: 507 initial value 99.022358 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 115.922267 iter 10 value 93.243756 iter 20 value 93.221551 final value 93.221395 converged Fitting Repeat 5 # weights: 507 initial value 101.975789 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 108.450981 iter 10 value 94.485923 iter 20 value 94.049257 iter 30 value 94.014099 final value 94.012417 converged Fitting Repeat 2 # weights: 103 initial value 112.008871 iter 10 value 94.474840 iter 20 value 94.000522 iter 30 value 93.928171 final value 93.927614 converged Fitting Repeat 3 # weights: 103 initial value 98.849186 iter 10 value 94.298265 iter 20 value 87.862342 iter 30 value 85.209557 iter 40 value 83.605529 final value 83.386658 converged Fitting Repeat 4 # weights: 103 initial value 104.736501 iter 10 value 94.424214 iter 20 value 87.185270 iter 30 value 86.853464 iter 40 value 86.451065 iter 50 value 86.301922 iter 60 value 85.385204 iter 70 value 84.121527 iter 80 value 83.697017 iter 90 value 83.453982 iter 100 value 83.289712 final value 83.289712 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 102.367252 iter 10 value 94.467551 iter 20 value 85.228776 iter 30 value 83.860798 iter 40 value 83.395644 iter 50 value 83.268052 final value 83.264624 converged Fitting Repeat 1 # weights: 305 initial value 119.571132 iter 10 value 95.342512 iter 20 value 94.549850 iter 30 value 94.534305 iter 40 value 88.229884 iter 50 value 86.676222 iter 60 value 85.512054 iter 70 value 85.296749 iter 80 value 83.396949 iter 90 value 83.086957 iter 100 value 81.513940 final value 81.513940 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.420328 iter 10 value 94.414975 iter 20 value 93.449646 iter 30 value 92.110844 iter 40 value 89.822044 iter 50 value 85.153111 iter 60 value 84.380430 iter 70 value 84.049661 iter 80 value 83.788079 iter 90 value 83.562338 iter 100 value 81.905664 final value 81.905664 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 106.799690 iter 10 value 94.474582 iter 20 value 93.728230 iter 30 value 91.456582 iter 40 value 83.930467 iter 50 value 81.272120 iter 60 value 80.398985 iter 70 value 80.132863 iter 80 value 79.912564 iter 90 value 79.816643 iter 100 value 79.593050 final value 79.593050 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 101.063501 iter 10 value 94.123930 iter 20 value 93.928270 iter 30 value 93.752899 iter 40 value 88.524500 iter 50 value 81.532204 iter 60 value 80.718734 iter 70 value 80.097283 iter 80 value 79.915213 iter 90 value 79.771099 iter 100 value 79.676201 final value 79.676201 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.066659 iter 10 value 94.638532 iter 20 value 92.602312 iter 30 value 90.266516 iter 40 value 84.480958 iter 50 value 81.802928 iter 60 value 80.746884 iter 70 value 80.250033 iter 80 value 79.536813 iter 90 value 79.193483 iter 100 value 78.946888 final value 78.946888 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 117.209089 iter 10 value 94.523121 iter 20 value 87.643055 iter 30 value 83.817463 iter 40 value 83.332617 iter 50 value 83.024301 iter 60 value 82.887722 iter 70 value 82.372226 iter 80 value 81.271415 iter 90 value 80.898225 iter 100 value 80.241672 final value 80.241672 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 105.067285 iter 10 value 94.328097 iter 20 value 92.410909 iter 30 value 91.104297 iter 40 value 85.188179 iter 50 value 83.845662 iter 60 value 81.866343 iter 70 value 80.586140 iter 80 value 80.196894 iter 90 value 79.913300 iter 100 value 79.587842 final value 79.587842 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 106.734655 iter 10 value 93.167065 iter 20 value 90.015393 iter 30 value 85.812911 iter 40 value 85.039533 iter 50 value 84.869797 iter 60 value 84.602746 iter 70 value 82.226714 iter 80 value 81.199124 iter 90 value 80.692226 iter 100 value 80.267667 final value 80.267667 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 104.645966 iter 10 value 96.625745 iter 20 value 94.435869 iter 30 value 92.285419 iter 40 value 88.824513 iter 50 value 84.376997 iter 60 value 83.175695 iter 70 value 82.256921 iter 80 value 80.452704 iter 90 value 80.006259 iter 100 value 79.862829 final value 79.862829 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 131.255243 iter 10 value 94.785865 iter 20 value 92.622646 iter 30 value 87.248129 iter 40 value 82.627329 iter 50 value 82.178621 iter 60 value 81.642057 iter 70 value 81.001555 iter 80 value 80.478401 iter 90 value 80.375920 iter 100 value 79.699196 final value 79.699196 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 102.351413 final value 94.485722 converged Fitting Repeat 2 # weights: 103 initial value 100.835983 final value 94.485874 converged Fitting Repeat 3 # weights: 103 initial value 104.538713 final value 94.485782 converged Fitting Repeat 4 # weights: 103 initial value 97.330232 final value 94.485650 converged Fitting Repeat 5 # weights: 103 initial value 95.061661 final value 94.486204 converged Fitting Repeat 1 # weights: 305 initial value 110.882332 iter 10 value 93.572737 iter 20 value 91.976743 iter 30 value 91.350192 iter 40 value 91.264581 iter 50 value 91.217588 iter 60 value 91.207243 final value 91.207162 converged Fitting Repeat 2 # weights: 305 initial value 105.962102 iter 10 value 94.031330 iter 20 value 93.921859 iter 30 value 89.213640 iter 40 value 84.373092 iter 50 value 84.369419 iter 60 value 83.908332 iter 70 value 83.859772 iter 80 value 83.850448 iter 90 value 83.763078 iter 100 value 83.756077 final value 83.756077 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 104.071906 iter 10 value 94.489004 iter 20 value 94.476726 iter 30 value 93.912109 iter 40 value 93.892112 final value 93.823110 converged Fitting Repeat 4 # weights: 305 initial value 98.101369 iter 10 value 94.488944 iter 20 value 94.484189 iter 30 value 90.271231 iter 40 value 90.051644 iter 50 value 90.040804 iter 60 value 90.030917 iter 70 value 90.002306 iter 80 value 89.559971 iter 90 value 85.407110 iter 100 value 81.465968 final value 81.465968 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 107.394968 iter 10 value 94.489281 iter 20 value 93.582007 iter 30 value 93.571151 iter 40 value 93.563648 iter 50 value 86.943746 iter 60 value 86.691731 iter 70 value 86.664402 iter 80 value 84.908182 iter 90 value 84.743434 iter 100 value 84.743343 final value 84.743343 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 122.609059 iter 10 value 93.843601 iter 20 value 93.837538 iter 30 value 93.824772 iter 40 value 85.333692 iter 50 value 84.341516 iter 60 value 84.256002 iter 70 value 84.246808 iter 80 value 84.094842 iter 90 value 82.541822 iter 100 value 82.288522 final value 82.288522 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 123.388656 iter 10 value 94.492464 iter 20 value 94.473074 iter 30 value 93.912339 final value 93.912331 converged Fitting Repeat 3 # weights: 507 initial value 102.352608 iter 10 value 94.488667 iter 20 value 94.444890 iter 30 value 87.143128 iter 40 value 84.732754 iter 50 value 81.055227 iter 60 value 80.614588 iter 70 value 80.519620 final value 80.518110 converged Fitting Repeat 4 # weights: 507 initial value 96.392438 iter 10 value 94.034846 iter 20 value 94.027646 iter 30 value 94.007457 iter 40 value 90.651613 iter 50 value 87.334018 iter 60 value 87.303133 iter 70 value 87.290893 iter 80 value 86.748188 iter 90 value 84.068811 iter 100 value 83.704148 final value 83.704148 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 102.708935 iter 10 value 93.167569 iter 20 value 93.165338 iter 30 value 93.158988 iter 40 value 93.158699 iter 50 value 92.998400 iter 60 value 91.967789 iter 70 value 88.761817 iter 80 value 88.613623 iter 90 value 88.613186 iter 100 value 88.613054 final value 88.613054 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.672702 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 103.580544 iter 10 value 94.042045 final value 94.042013 converged Fitting Repeat 3 # weights: 103 initial value 101.298404 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 98.713903 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 100.348533 final value 94.038251 converged Fitting Repeat 1 # weights: 305 initial value 97.705344 iter 10 value 93.624047 iter 20 value 93.491109 iter 20 value 93.491109 iter 20 value 93.491108 final value 93.491108 converged Fitting Repeat 2 # weights: 305 initial value 107.483666 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 96.631058 iter 10 value 94.040651 final value 94.038251 converged Fitting Repeat 4 # weights: 305 initial value 123.063350 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 103.631524 iter 10 value 87.360618 iter 20 value 83.660884 iter 30 value 83.235962 iter 40 value 82.501739 iter 50 value 82.080195 iter 60 value 82.080061 iter 60 value 82.080061 iter 60 value 82.080061 final value 82.080061 converged Fitting Repeat 1 # weights: 507 initial value 109.534948 iter 10 value 94.041912 iter 20 value 94.038256 final value 94.038252 converged Fitting Repeat 2 # weights: 507 initial value 99.291850 iter 10 value 93.123449 iter 20 value 92.701796 final value 92.701657 converged Fitting Repeat 3 # weights: 507 initial value 108.716439 final value 94.011429 converged Fitting Repeat 4 # weights: 507 initial value 102.804219 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 107.366506 iter 10 value 87.088651 iter 20 value 85.928086 iter 30 value 85.901873 final value 85.896859 converged Fitting Repeat 1 # weights: 103 initial value 105.177801 iter 10 value 94.298120 iter 20 value 86.594797 iter 30 value 86.210749 iter 40 value 86.104108 iter 50 value 85.962355 iter 60 value 85.586456 iter 70 value 85.540841 final value 85.529587 converged Fitting Repeat 2 # weights: 103 initial value 95.970250 iter 10 value 94.055558 iter 20 value 90.927913 iter 30 value 86.270769 iter 40 value 86.023545 iter 50 value 85.619832 iter 60 value 85.591538 iter 70 value 85.561715 final value 85.553352 converged Fitting Repeat 3 # weights: 103 initial value 97.540214 iter 10 value 93.960839 iter 20 value 87.065491 iter 30 value 85.722139 iter 40 value 85.307750 iter 50 value 85.194948 iter 60 value 84.926876 iter 70 value 84.924170 final value 84.924107 converged Fitting Repeat 4 # weights: 103 initial value 96.899436 iter 10 value 92.844087 iter 20 value 86.226162 iter 30 value 85.754180 iter 40 value 85.474737 iter 50 value 85.303914 final value 85.303724 converged Fitting Repeat 5 # weights: 103 initial value 97.488982 iter 10 value 93.950067 iter 20 value 92.207452 iter 30 value 91.731419 iter 40 value 89.376849 iter 50 value 84.500830 iter 60 value 84.000656 iter 70 value 83.176000 iter 80 value 83.089180 iter 90 value 83.065541 iter 100 value 83.053747 final value 83.053747 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 120.268431 iter 10 value 94.116935 iter 20 value 91.309513 iter 30 value 89.034933 iter 40 value 83.211650 iter 50 value 82.072062 iter 60 value 81.847065 iter 70 value 81.753967 iter 80 value 81.723052 iter 90 value 81.717954 iter 100 value 81.710963 final value 81.710963 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.172630 iter 10 value 94.064579 iter 20 value 90.577594 iter 30 value 87.741907 iter 40 value 85.917821 iter 50 value 84.789953 iter 60 value 84.238666 iter 70 value 84.013702 iter 80 value 83.985453 iter 90 value 83.951090 iter 100 value 83.495370 final value 83.495370 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 106.294428 iter 10 value 94.044384 iter 20 value 93.524914 iter 30 value 90.051372 iter 40 value 85.032425 iter 50 value 83.906845 iter 60 value 82.962939 iter 70 value 82.691894 iter 80 value 82.529500 iter 90 value 82.313720 iter 100 value 82.200555 final value 82.200555 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 110.390790 iter 10 value 94.015808 iter 20 value 90.477499 iter 30 value 87.870556 iter 40 value 87.616340 iter 50 value 86.002878 iter 60 value 85.570187 iter 70 value 84.747372 iter 80 value 84.138065 iter 90 value 83.635756 iter 100 value 83.129891 final value 83.129891 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 103.988889 iter 10 value 94.064648 iter 20 value 88.129723 iter 30 value 86.244508 iter 40 value 85.806812 iter 50 value 84.225921 iter 60 value 83.648538 iter 70 value 83.064017 iter 80 value 82.972387 iter 90 value 82.958244 iter 100 value 82.956294 final value 82.956294 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.409822 iter 10 value 94.033055 iter 20 value 90.532311 iter 30 value 87.170065 iter 40 value 83.841258 iter 50 value 83.001160 iter 60 value 82.387703 iter 70 value 82.097970 iter 80 value 81.874461 iter 90 value 81.796600 iter 100 value 81.710091 final value 81.710091 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 109.636321 iter 10 value 94.422608 iter 20 value 91.786257 iter 30 value 86.676282 iter 40 value 86.086768 iter 50 value 85.560424 iter 60 value 84.495708 iter 70 value 83.257720 iter 80 value 82.787922 iter 90 value 82.001814 iter 100 value 81.826231 final value 81.826231 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 109.385941 iter 10 value 94.583132 iter 20 value 92.167076 iter 30 value 85.396605 iter 40 value 84.017884 iter 50 value 83.293752 iter 60 value 82.413092 iter 70 value 81.900483 iter 80 value 81.765578 iter 90 value 81.723645 iter 100 value 81.715434 final value 81.715434 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 112.702322 iter 10 value 93.553815 iter 20 value 88.632257 iter 30 value 86.285888 iter 40 value 84.142975 iter 50 value 82.232134 iter 60 value 81.668453 iter 70 value 81.514658 iter 80 value 81.367803 iter 90 value 81.331999 iter 100 value 81.326234 final value 81.326234 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 113.415432 iter 10 value 93.436405 iter 20 value 88.472885 iter 30 value 84.346244 iter 40 value 83.553329 iter 50 value 82.772087 iter 60 value 81.715314 iter 70 value 81.553433 iter 80 value 81.398752 iter 90 value 81.337231 iter 100 value 81.335634 final value 81.335634 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.625062 final value 94.055408 converged Fitting Repeat 2 # weights: 103 initial value 95.273948 final value 94.054631 converged Fitting Repeat 3 # weights: 103 initial value 97.398360 final value 94.054356 converged Fitting Repeat 4 # weights: 103 initial value 98.726720 final value 93.630114 converged Fitting Repeat 5 # weights: 103 initial value 101.158860 final value 94.054382 converged Fitting Repeat 1 # weights: 305 initial value 129.472720 iter 10 value 94.059217 iter 20 value 94.043902 final value 94.039649 converged Fitting Repeat 2 # weights: 305 initial value 110.109398 iter 10 value 94.057661 iter 20 value 94.053116 iter 30 value 93.805314 iter 40 value 89.030266 iter 50 value 87.497613 iter 60 value 87.489924 iter 70 value 87.487909 iter 80 value 87.481804 iter 90 value 87.160915 iter 100 value 86.562281 final value 86.562281 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 98.659294 iter 10 value 94.043318 iter 20 value 94.038709 final value 94.038274 converged Fitting Repeat 4 # weights: 305 initial value 96.678304 iter 10 value 94.057157 iter 20 value 91.106645 iter 30 value 87.026684 final value 86.752312 converged Fitting Repeat 5 # weights: 305 initial value 105.192938 iter 10 value 94.016407 iter 20 value 94.011692 iter 30 value 92.326044 iter 40 value 90.214521 iter 50 value 84.913087 iter 60 value 83.337439 iter 70 value 83.038531 iter 80 value 82.763023 final value 82.757292 converged Fitting Repeat 1 # weights: 507 initial value 107.879531 iter 10 value 94.061153 iter 20 value 92.274758 iter 30 value 92.260930 iter 40 value 92.250977 iter 50 value 92.245788 iter 60 value 92.233389 iter 70 value 92.225007 iter 80 value 91.230294 iter 90 value 85.388691 iter 100 value 85.374442 final value 85.374442 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 96.103058 iter 10 value 91.934340 iter 20 value 91.518743 iter 30 value 91.027088 iter 40 value 90.970653 iter 50 value 90.948909 iter 60 value 90.904673 iter 70 value 90.758317 iter 80 value 90.748803 iter 90 value 90.745481 iter 100 value 90.745231 final value 90.745231 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 94.984899 iter 10 value 94.046337 iter 20 value 93.983247 iter 30 value 87.451295 iter 40 value 87.254405 iter 50 value 87.238270 iter 60 value 87.237986 iter 70 value 85.182745 iter 80 value 85.159444 final value 85.159442 converged Fitting Repeat 4 # weights: 507 initial value 98.318007 iter 10 value 94.046444 iter 20 value 93.501928 iter 30 value 85.467151 iter 40 value 85.220975 iter 50 value 85.220677 iter 60 value 85.218432 iter 70 value 84.519861 iter 80 value 84.506128 iter 90 value 84.505469 iter 90 value 84.505468 iter 90 value 84.505468 final value 84.505468 converged Fitting Repeat 5 # weights: 507 initial value 100.443331 iter 10 value 94.046155 iter 20 value 93.933421 iter 30 value 85.989352 iter 40 value 85.597964 iter 50 value 84.881569 iter 60 value 84.791197 iter 70 value 84.790657 final value 84.790653 converged Fitting Repeat 1 # weights: 103 initial value 107.174128 iter 10 value 93.213618 iter 20 value 93.128762 iter 30 value 93.122031 final value 93.122019 converged Fitting Repeat 2 # weights: 103 initial value 102.706450 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 97.782673 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 106.252803 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 103.084199 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 97.041874 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 104.633839 final value 93.962011 converged Fitting Repeat 3 # weights: 305 initial value 98.800175 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 102.569597 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 108.724842 iter 10 value 84.585689 iter 20 value 84.129565 final value 84.129252 converged Fitting Repeat 1 # weights: 507 initial value 97.409562 iter 10 value 93.900001 final value 93.900000 converged Fitting Repeat 2 # weights: 507 initial value 94.493496 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 95.539704 iter 10 value 93.178579 iter 10 value 93.178578 iter 10 value 93.178578 final value 93.178578 converged Fitting Repeat 4 # weights: 507 initial value 110.085082 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 116.430259 iter 10 value 92.974311 iter 20 value 92.670184 iter 30 value 92.641213 final value 92.641210 converged Fitting Repeat 1 # weights: 103 initial value 99.793928 iter 10 value 93.320500 iter 20 value 88.665635 iter 30 value 87.265213 iter 40 value 86.905938 iter 50 value 86.548930 iter 60 value 86.501942 iter 70 value 84.361203 iter 80 value 84.083363 iter 90 value 83.980491 iter 100 value 82.765648 final value 82.765648 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 97.985143 iter 10 value 94.031909 iter 20 value 93.610324 iter 30 value 93.350434 iter 40 value 93.329118 iter 50 value 93.266757 iter 60 value 88.517328 iter 70 value 85.287268 iter 80 value 84.919662 iter 90 value 84.727472 iter 100 value 84.697023 final value 84.697023 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 113.025386 iter 10 value 94.016002 iter 20 value 93.686327 iter 30 value 93.685619 iter 40 value 89.064217 iter 50 value 88.374493 iter 60 value 86.565330 iter 70 value 86.182628 iter 80 value 85.989189 iter 90 value 83.866239 iter 100 value 83.619918 final value 83.619918 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 98.166483 iter 10 value 94.058487 iter 20 value 92.780612 iter 30 value 87.073117 iter 40 value 85.186952 iter 50 value 84.673891 iter 60 value 84.538785 iter 70 value 84.324735 iter 80 value 82.615298 iter 90 value 82.000678 iter 100 value 81.334357 final value 81.334357 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 98.900482 iter 10 value 93.963908 iter 20 value 93.207792 iter 30 value 92.654861 iter 40 value 87.811783 iter 50 value 85.176434 iter 60 value 84.739365 iter 70 value 84.700526 final value 84.697023 converged Fitting Repeat 1 # weights: 305 initial value 100.514627 iter 10 value 94.025120 iter 20 value 87.917640 iter 30 value 86.707699 iter 40 value 84.096433 iter 50 value 83.357746 iter 60 value 83.112621 iter 70 value 82.734651 iter 80 value 82.549151 iter 90 value 82.469584 iter 100 value 82.350234 final value 82.350234 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 101.861304 iter 10 value 94.278254 iter 20 value 93.116763 iter 30 value 88.842652 iter 40 value 87.471452 iter 50 value 85.091293 iter 60 value 84.738445 iter 70 value 84.046362 iter 80 value 83.944192 iter 90 value 83.481212 iter 100 value 81.561090 final value 81.561090 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 111.107969 iter 10 value 94.037388 iter 20 value 93.809514 iter 30 value 93.325444 iter 40 value 87.436529 iter 50 value 84.823823 iter 60 value 84.678823 iter 70 value 84.008170 iter 80 value 83.757813 iter 90 value 83.075262 iter 100 value 81.765279 final value 81.765279 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 101.197096 iter 10 value 93.907333 iter 20 value 93.177608 iter 30 value 87.236301 iter 40 value 84.701304 iter 50 value 82.227785 iter 60 value 81.063023 iter 70 value 80.636038 iter 80 value 80.213320 iter 90 value 79.901059 iter 100 value 79.701428 final value 79.701428 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 100.553932 iter 10 value 94.646048 iter 20 value 93.090388 iter 30 value 89.610460 iter 40 value 84.107196 iter 50 value 82.948284 iter 60 value 82.705613 iter 70 value 82.304944 iter 80 value 80.891990 iter 90 value 80.534512 iter 100 value 80.455097 final value 80.455097 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.417946 iter 10 value 93.760586 iter 20 value 93.569279 iter 30 value 92.484413 iter 40 value 85.933898 iter 50 value 85.421651 iter 60 value 83.925273 iter 70 value 82.830249 iter 80 value 81.902396 iter 90 value 80.827444 iter 100 value 80.331542 final value 80.331542 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 137.796253 iter 10 value 94.126898 iter 20 value 93.911313 iter 30 value 85.565998 iter 40 value 85.047455 iter 50 value 83.949684 iter 60 value 83.598367 iter 70 value 83.051339 iter 80 value 81.438177 iter 90 value 80.577937 iter 100 value 80.126504 final value 80.126504 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 109.631173 iter 10 value 95.536137 iter 20 value 94.190143 iter 30 value 93.792637 iter 40 value 88.594502 iter 50 value 84.287076 iter 60 value 82.338201 iter 70 value 81.443705 iter 80 value 80.500179 iter 90 value 80.344642 iter 100 value 80.283993 final value 80.283993 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 112.797939 iter 10 value 98.102622 iter 20 value 93.041283 iter 30 value 90.018835 iter 40 value 85.442667 iter 50 value 84.292748 iter 60 value 83.376653 iter 70 value 82.913210 iter 80 value 82.874195 iter 90 value 82.583558 iter 100 value 82.408073 final value 82.408073 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 112.559789 iter 10 value 94.007132 iter 20 value 88.217835 iter 30 value 86.015622 iter 40 value 84.943933 iter 50 value 81.308675 iter 60 value 80.616074 iter 70 value 80.263723 iter 80 value 79.994719 iter 90 value 79.910360 iter 100 value 79.890963 final value 79.890963 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 103.025941 final value 94.054592 converged Fitting Repeat 2 # weights: 103 initial value 104.916616 final value 94.054475 converged Fitting Repeat 3 # weights: 103 initial value 96.648599 final value 94.054569 converged Fitting Repeat 4 # weights: 103 initial value 98.488073 final value 94.054490 converged Fitting Repeat 5 # weights: 103 initial value 100.617641 iter 10 value 94.054526 iter 20 value 94.052179 iter 30 value 90.464561 iter 40 value 90.001405 iter 50 value 89.644397 iter 60 value 89.636253 iter 70 value 89.635356 iter 80 value 84.888207 iter 90 value 84.763443 iter 100 value 84.454413 final value 84.454413 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 95.482143 iter 10 value 94.057967 iter 20 value 93.896827 iter 30 value 84.643896 iter 40 value 84.391543 iter 50 value 84.169532 iter 60 value 84.167630 iter 70 value 84.166915 iter 80 value 84.164666 final value 84.164249 converged Fitting Repeat 2 # weights: 305 initial value 100.255805 iter 10 value 94.057385 iter 20 value 93.969001 final value 93.582618 converged Fitting Repeat 3 # weights: 305 initial value 116.204699 iter 10 value 93.587658 iter 20 value 93.583065 iter 30 value 93.121214 iter 40 value 84.556422 iter 50 value 84.215548 iter 60 value 82.918704 iter 70 value 82.914637 iter 80 value 82.912244 iter 90 value 82.332117 iter 100 value 82.328896 final value 82.328896 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 110.726382 iter 10 value 94.057255 iter 20 value 93.734950 final value 93.226551 converged Fitting Repeat 5 # weights: 305 initial value 99.040681 iter 10 value 94.058245 iter 20 value 94.045488 iter 30 value 93.065672 final value 93.056733 converged Fitting Repeat 1 # weights: 507 initial value 94.355596 iter 10 value 94.059456 iter 20 value 94.011027 iter 30 value 85.968536 iter 40 value 85.346538 iter 50 value 82.610386 iter 60 value 82.312602 iter 70 value 82.311354 iter 80 value 82.310517 iter 90 value 82.309386 iter 100 value 82.308705 final value 82.308705 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 113.033778 iter 10 value 93.460507 iter 20 value 93.459096 iter 30 value 93.458184 iter 40 value 87.642567 iter 50 value 87.042561 iter 60 value 86.063739 final value 86.040167 converged Fitting Repeat 3 # weights: 507 initial value 113.685460 iter 10 value 93.590395 iter 20 value 93.569317 iter 30 value 93.473066 iter 40 value 93.472334 iter 50 value 92.372973 iter 60 value 85.719260 iter 70 value 85.398975 iter 80 value 83.607256 iter 90 value 81.198522 iter 100 value 81.117409 final value 81.117409 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 97.192808 iter 10 value 94.063311 iter 20 value 93.808821 iter 30 value 93.504878 iter 40 value 86.122316 iter 50 value 86.039474 iter 60 value 85.946381 iter 70 value 84.125050 iter 80 value 83.960465 iter 90 value 83.955867 final value 83.955832 converged Fitting Repeat 5 # weights: 507 initial value 110.994499 iter 10 value 93.590805 iter 20 value 93.584205 iter 30 value 93.094574 iter 40 value 89.411387 iter 50 value 87.235858 iter 60 value 86.718626 iter 70 value 84.221224 iter 80 value 82.719782 iter 90 value 82.258806 iter 100 value 82.251178 final value 82.251178 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.642650 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 101.381185 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 102.611528 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 99.255827 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 97.581395 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 95.206795 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 95.693191 final value 94.467391 converged Fitting Repeat 3 # weights: 305 initial value 96.696129 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 96.275486 iter 10 value 86.705838 iter 20 value 86.514977 iter 30 value 86.512750 final value 86.512739 converged Fitting Repeat 5 # weights: 305 initial value 100.173838 iter 10 value 94.430233 iter 10 value 94.430233 iter 10 value 94.430233 final value 94.430233 converged Fitting Repeat 1 # weights: 507 initial value 98.361441 iter 10 value 94.064368 iter 10 value 94.064368 iter 10 value 94.064368 final value 94.064368 converged Fitting Repeat 2 # weights: 507 initial value 106.482729 final value 94.449438 converged Fitting Repeat 3 # weights: 507 initial value 104.043171 final value 94.252924 converged Fitting Repeat 4 # weights: 507 initial value 101.955304 iter 10 value 89.702029 iter 20 value 87.951989 iter 30 value 87.936156 iter 40 value 87.856505 iter 50 value 87.855346 iter 50 value 87.855346 iter 50 value 87.855346 final value 87.855346 converged Fitting Repeat 5 # weights: 507 initial value 95.491765 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 103.562176 iter 10 value 94.602299 iter 20 value 94.552351 iter 30 value 94.337899 iter 40 value 85.957686 iter 50 value 85.501231 iter 60 value 85.088535 iter 70 value 84.931918 iter 80 value 84.729168 iter 90 value 84.530702 final value 84.530009 converged Fitting Repeat 2 # weights: 103 initial value 99.935700 iter 10 value 94.488269 iter 20 value 93.971153 iter 30 value 93.209828 iter 40 value 92.185473 iter 50 value 88.783094 iter 60 value 86.296179 iter 70 value 85.884866 iter 80 value 85.206350 iter 90 value 84.527437 iter 100 value 84.043349 final value 84.043349 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 105.127904 iter 10 value 94.344379 iter 20 value 87.767094 iter 30 value 87.370737 iter 40 value 85.483268 iter 50 value 85.025477 iter 60 value 83.743109 iter 70 value 83.062510 iter 80 value 82.723607 iter 90 value 82.645254 final value 82.645193 converged Fitting Repeat 4 # weights: 103 initial value 96.886263 iter 10 value 94.496855 iter 20 value 92.173327 iter 30 value 85.864021 iter 40 value 85.345015 iter 50 value 85.240876 iter 60 value 84.397655 iter 70 value 83.036478 iter 80 value 82.645227 final value 82.645193 converged Fitting Repeat 5 # weights: 103 initial value 106.153047 iter 10 value 94.488287 iter 20 value 92.565529 iter 30 value 89.101181 iter 40 value 88.786314 iter 50 value 88.570150 iter 60 value 88.151500 iter 70 value 87.970004 iter 80 value 87.534336 iter 90 value 85.705313 iter 100 value 85.692553 final value 85.692553 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 104.220836 iter 10 value 94.462862 iter 20 value 94.263602 iter 30 value 92.475245 iter 40 value 92.051218 iter 50 value 91.965089 iter 60 value 91.329994 iter 70 value 90.413944 iter 80 value 85.543161 iter 90 value 83.270238 iter 100 value 82.532054 final value 82.532054 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 119.091478 iter 10 value 94.448584 iter 20 value 88.207536 iter 30 value 86.584627 iter 40 value 85.529729 iter 50 value 85.383088 iter 60 value 84.735847 iter 70 value 82.742833 iter 80 value 82.487252 iter 90 value 82.474649 iter 100 value 82.280821 final value 82.280821 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 109.402312 iter 10 value 94.052460 iter 20 value 88.482022 iter 30 value 86.732014 iter 40 value 86.298474 iter 50 value 85.993523 iter 60 value 85.699144 iter 70 value 84.113410 iter 80 value 82.207922 iter 90 value 81.879057 iter 100 value 81.779014 final value 81.779014 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 106.224280 iter 10 value 94.278999 iter 20 value 88.819792 iter 30 value 87.904466 iter 40 value 86.199582 iter 50 value 85.574974 iter 60 value 84.613293 iter 70 value 84.112939 iter 80 value 83.803407 iter 90 value 83.136044 iter 100 value 82.182998 final value 82.182998 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 99.909580 iter 10 value 94.432618 iter 20 value 89.646707 iter 30 value 87.356988 iter 40 value 85.529709 iter 50 value 84.785366 iter 60 value 84.381475 iter 70 value 84.249839 iter 80 value 84.051332 iter 90 value 83.218047 iter 100 value 82.053045 final value 82.053045 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 109.585336 iter 10 value 94.484418 iter 20 value 86.924333 iter 30 value 84.312463 iter 40 value 82.222722 iter 50 value 81.985899 iter 60 value 81.836535 iter 70 value 81.813424 iter 80 value 81.723777 iter 90 value 81.483005 iter 100 value 81.216674 final value 81.216674 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 121.307528 iter 10 value 94.399696 iter 20 value 89.041515 iter 30 value 87.009411 iter 40 value 85.795890 iter 50 value 84.536160 iter 60 value 82.721701 iter 70 value 81.526774 iter 80 value 81.446459 iter 90 value 81.257747 iter 100 value 81.093637 final value 81.093637 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.852733 iter 10 value 88.750012 iter 20 value 85.165753 iter 30 value 83.894467 iter 40 value 83.487835 iter 50 value 83.382953 iter 60 value 82.342664 iter 70 value 81.723581 iter 80 value 81.365142 iter 90 value 81.166401 iter 100 value 81.145047 final value 81.145047 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 126.037981 iter 10 value 95.836429 iter 20 value 87.466282 iter 30 value 86.384601 iter 40 value 85.556705 iter 50 value 85.230069 iter 60 value 84.727269 iter 70 value 84.580663 iter 80 value 84.060140 iter 90 value 83.192783 iter 100 value 81.732673 final value 81.732673 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.146232 iter 10 value 95.342873 iter 20 value 94.038058 iter 30 value 88.116480 iter 40 value 86.381435 iter 50 value 84.241473 iter 60 value 83.700048 iter 70 value 82.372799 iter 80 value 82.083045 iter 90 value 81.827340 iter 100 value 81.579208 final value 81.579208 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 103.854954 final value 94.485928 converged Fitting Repeat 2 # weights: 103 initial value 104.472129 final value 94.485718 converged Fitting Repeat 3 # weights: 103 initial value 97.272204 iter 10 value 94.433300 iter 20 value 94.431853 iter 30 value 94.431386 iter 40 value 93.955048 iter 50 value 93.947919 final value 93.947911 converged Fitting Repeat 4 # weights: 103 initial value 102.954459 final value 94.485912 converged Fitting Repeat 5 # weights: 103 initial value 97.573777 final value 94.485893 converged Fitting Repeat 1 # weights: 305 initial value 94.875417 iter 10 value 94.487868 final value 94.467435 converged Fitting Repeat 2 # weights: 305 initial value 97.147713 iter 10 value 94.472430 iter 20 value 94.470578 iter 30 value 94.466935 iter 40 value 94.014985 final value 93.763277 converged Fitting Repeat 3 # weights: 305 initial value 102.508504 iter 10 value 94.488999 iter 20 value 94.462508 iter 30 value 93.773458 iter 40 value 93.696247 iter 50 value 87.553307 iter 60 value 87.547137 iter 70 value 87.542302 final value 87.541910 converged Fitting Repeat 4 # weights: 305 initial value 106.526744 iter 10 value 94.472042 iter 20 value 94.062816 iter 30 value 87.111119 iter 40 value 86.136470 iter 50 value 86.048222 iter 60 value 84.294065 iter 70 value 82.691758 iter 80 value 81.826129 iter 90 value 81.803013 iter 100 value 81.801984 final value 81.801984 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 114.655876 iter 10 value 94.489462 iter 20 value 93.345301 iter 30 value 87.854812 final value 87.213493 converged Fitting Repeat 1 # weights: 507 initial value 100.187997 iter 10 value 94.491650 iter 20 value 94.387969 iter 30 value 86.163202 iter 40 value 85.601519 iter 50 value 82.572961 iter 60 value 82.198461 iter 70 value 82.153309 iter 80 value 82.125721 iter 90 value 81.872167 iter 100 value 81.840796 final value 81.840796 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 98.996284 iter 10 value 94.146741 iter 20 value 93.406133 iter 30 value 87.295349 iter 40 value 87.293715 iter 50 value 87.293045 iter 60 value 87.290313 iter 70 value 87.289776 iter 80 value 87.289627 iter 90 value 87.289123 iter 100 value 87.288723 final value 87.288723 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 102.374237 iter 10 value 94.490996 iter 20 value 92.136286 iter 30 value 87.300854 iter 40 value 87.296130 iter 50 value 87.212557 iter 60 value 87.201987 iter 70 value 85.103170 iter 80 value 84.384589 iter 90 value 84.238197 iter 100 value 84.236657 final value 84.236657 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 113.611363 iter 10 value 94.491863 iter 20 value 94.484495 iter 30 value 92.635164 iter 40 value 91.426421 iter 50 value 91.389121 iter 60 value 86.482388 iter 70 value 85.212180 iter 80 value 85.208458 iter 90 value 85.207120 iter 100 value 85.028577 final value 85.028577 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 95.431790 iter 10 value 94.475100 iter 20 value 94.470222 iter 30 value 92.220199 iter 40 value 87.374786 iter 50 value 87.329875 iter 60 value 87.320486 iter 70 value 87.320179 iter 70 value 87.320179 iter 70 value 87.320179 final value 87.320179 converged Fitting Repeat 1 # weights: 103 initial value 106.847977 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 100.195128 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 98.363331 iter 10 value 92.637296 iter 20 value 88.212171 final value 88.212122 converged Fitting Repeat 4 # weights: 103 initial value 97.927188 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 102.741804 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 128.257257 final value 94.139368 converged Fitting Repeat 2 # weights: 305 initial value 105.784105 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 95.704302 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 97.519567 iter 10 value 93.300000 iter 10 value 93.300000 iter 10 value 93.300000 final value 93.300000 converged Fitting Repeat 5 # weights: 305 initial value 115.661718 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 105.006289 iter 10 value 94.275362 iter 10 value 94.275362 iter 10 value 94.275362 final value 94.275362 converged Fitting Repeat 2 # weights: 507 initial value 112.061017 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 98.732085 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 96.753313 iter 10 value 93.286219 iter 20 value 86.965504 final value 86.961905 converged Fitting Repeat 5 # weights: 507 initial value 103.326773 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 99.145063 iter 10 value 94.486361 iter 20 value 94.135342 iter 30 value 87.676231 iter 40 value 87.101414 iter 50 value 86.845084 iter 60 value 83.911483 iter 70 value 83.170203 iter 80 value 83.161957 final value 83.161938 converged Fitting Repeat 2 # weights: 103 initial value 120.503451 iter 10 value 94.487056 iter 20 value 94.391992 iter 30 value 89.570879 iter 40 value 84.178327 iter 50 value 84.006176 iter 60 value 83.740090 iter 70 value 82.434147 iter 80 value 82.141204 final value 82.140837 converged Fitting Repeat 3 # weights: 103 initial value 99.634490 iter 10 value 94.486546 iter 20 value 94.143981 iter 30 value 94.118601 iter 40 value 94.104106 iter 50 value 88.485275 iter 60 value 88.133602 iter 70 value 85.135529 iter 80 value 82.739538 iter 90 value 82.339560 iter 100 value 82.305597 final value 82.305597 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 103.662916 iter 10 value 94.490356 iter 20 value 94.367731 iter 30 value 91.908311 iter 40 value 84.766347 iter 50 value 84.091453 iter 60 value 83.546802 iter 70 value 82.783424 iter 80 value 81.929677 iter 90 value 81.891880 final value 81.891878 converged Fitting Repeat 5 # weights: 103 initial value 116.015455 iter 10 value 94.366107 iter 20 value 86.059265 iter 30 value 85.470119 iter 40 value 83.519695 iter 50 value 82.641332 iter 60 value 82.401768 iter 70 value 80.459416 iter 80 value 80.144248 iter 90 value 80.086049 final value 80.084775 converged Fitting Repeat 1 # weights: 305 initial value 102.607804 iter 10 value 94.437020 iter 20 value 91.627692 iter 30 value 84.297430 iter 40 value 83.314391 iter 50 value 82.948512 iter 60 value 82.106416 iter 70 value 81.701919 iter 80 value 80.572563 iter 90 value 80.426951 iter 100 value 80.385511 final value 80.385511 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.763766 iter 10 value 94.433226 iter 20 value 89.197674 iter 30 value 88.026090 iter 40 value 83.477342 iter 50 value 80.562072 iter 60 value 79.989873 iter 70 value 79.424997 iter 80 value 78.979889 iter 90 value 78.823229 iter 100 value 78.735611 final value 78.735611 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 100.157721 iter 10 value 94.496455 iter 20 value 94.225903 iter 30 value 91.421351 iter 40 value 86.269534 iter 50 value 85.625606 iter 60 value 85.293795 iter 70 value 83.990686 iter 80 value 82.840970 iter 90 value 81.656404 iter 100 value 80.269773 final value 80.269773 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 101.215533 iter 10 value 94.122775 iter 20 value 86.840392 iter 30 value 86.534025 iter 40 value 86.407033 iter 50 value 84.863022 iter 60 value 82.850656 iter 70 value 82.802605 iter 80 value 82.581207 iter 90 value 80.173624 iter 100 value 79.486039 final value 79.486039 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 122.648639 iter 10 value 94.320344 iter 20 value 91.546945 iter 30 value 85.037011 iter 40 value 83.331502 iter 50 value 82.810704 iter 60 value 82.293008 iter 70 value 80.096946 iter 80 value 79.664369 iter 90 value 79.459269 iter 100 value 79.374455 final value 79.374455 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 131.679151 iter 10 value 94.603039 iter 20 value 90.092168 iter 30 value 84.174688 iter 40 value 82.112054 iter 50 value 81.008279 iter 60 value 80.539868 iter 70 value 79.345402 iter 80 value 78.829637 iter 90 value 78.624895 iter 100 value 78.536374 final value 78.536374 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 127.643374 iter 10 value 94.440447 iter 20 value 94.138747 iter 30 value 86.519611 iter 40 value 81.564111 iter 50 value 81.045843 iter 60 value 80.359765 iter 70 value 79.846038 iter 80 value 79.553332 iter 90 value 79.461715 iter 100 value 79.173870 final value 79.173870 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 119.039360 iter 10 value 94.879856 iter 20 value 91.279047 iter 30 value 86.444511 iter 40 value 83.752939 iter 50 value 82.278927 iter 60 value 79.870543 iter 70 value 79.492115 iter 80 value 79.200115 iter 90 value 78.989695 iter 100 value 78.913233 final value 78.913233 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 135.671268 iter 10 value 94.222257 iter 20 value 88.759386 iter 30 value 85.039130 iter 40 value 82.565392 iter 50 value 81.078299 iter 60 value 80.085460 iter 70 value 79.555823 iter 80 value 79.314797 iter 90 value 78.540638 iter 100 value 78.422227 final value 78.422227 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 136.117744 iter 10 value 94.342344 iter 20 value 88.987315 iter 30 value 86.023878 iter 40 value 83.773169 iter 50 value 82.664489 iter 60 value 81.189671 iter 70 value 81.101016 iter 80 value 80.352444 iter 90 value 79.379692 iter 100 value 79.095912 final value 79.095912 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.955503 final value 94.485822 converged Fitting Repeat 2 # weights: 103 initial value 98.147003 final value 94.485769 converged Fitting Repeat 3 # weights: 103 initial value 105.645530 final value 94.486012 converged Fitting Repeat 4 # weights: 103 initial value 104.589024 iter 10 value 94.485847 iter 20 value 94.484226 final value 94.484213 converged Fitting Repeat 5 # weights: 103 initial value 115.568910 final value 94.486125 converged Fitting Repeat 1 # weights: 305 initial value 98.579622 iter 10 value 94.489288 iter 20 value 94.398309 iter 30 value 90.453673 iter 40 value 85.171415 iter 50 value 85.115102 iter 60 value 85.104121 iter 70 value 85.088970 iter 80 value 85.082039 iter 90 value 85.079005 iter 100 value 85.074221 final value 85.074221 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 108.563640 iter 10 value 94.488970 iter 20 value 85.003842 iter 30 value 83.060610 final value 83.006838 converged Fitting Repeat 3 # weights: 305 initial value 102.668446 iter 10 value 94.489164 iter 20 value 94.482125 iter 30 value 92.347682 iter 40 value 92.301045 iter 50 value 87.729393 iter 60 value 86.143934 iter 70 value 86.110729 iter 80 value 84.596189 iter 90 value 84.561761 iter 100 value 84.555995 final value 84.555995 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 111.883061 iter 10 value 94.488105 iter 20 value 94.484229 final value 94.484224 converged Fitting Repeat 5 # weights: 305 initial value 102.714204 iter 10 value 94.489158 iter 20 value 94.484260 iter 30 value 94.282065 final value 94.275457 converged Fitting Repeat 1 # weights: 507 initial value 104.522067 iter 10 value 94.493848 iter 20 value 94.062313 iter 30 value 89.223803 iter 40 value 89.116498 iter 50 value 89.115873 final value 89.115725 converged Fitting Repeat 2 # weights: 507 initial value 119.152428 iter 10 value 94.489925 iter 20 value 94.069657 iter 30 value 86.021991 iter 40 value 85.909131 final value 85.909126 converged Fitting Repeat 3 # weights: 507 initial value 104.365259 iter 10 value 94.491929 iter 20 value 94.469010 iter 30 value 86.142536 iter 40 value 85.063118 iter 50 value 85.032460 iter 60 value 84.335119 iter 70 value 83.390441 iter 80 value 83.361964 iter 90 value 83.356449 final value 83.354412 converged Fitting Repeat 4 # weights: 507 initial value 116.423883 iter 10 value 94.493358 iter 20 value 94.235103 iter 30 value 93.302203 iter 40 value 93.296802 iter 50 value 88.793089 iter 60 value 88.786981 iter 70 value 88.476001 iter 80 value 88.392402 iter 90 value 88.387616 final value 88.383786 converged Fitting Repeat 5 # weights: 507 initial value 106.398538 iter 10 value 94.491747 iter 20 value 93.112218 iter 30 value 84.509186 iter 40 value 82.753271 iter 50 value 82.729220 iter 60 value 82.414555 iter 70 value 82.098262 iter 80 value 82.091114 final value 82.078584 converged Fitting Repeat 1 # weights: 507 initial value 130.798047 iter 10 value 118.824152 iter 20 value 109.857825 iter 30 value 108.248796 iter 40 value 105.603336 iter 50 value 105.103281 iter 60 value 104.866591 iter 70 value 103.190875 iter 80 value 102.105835 iter 90 value 101.779700 iter 100 value 101.493130 final value 101.493130 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 129.054764 iter 10 value 117.982962 iter 20 value 108.020650 iter 30 value 107.800687 iter 40 value 106.943128 iter 50 value 105.229847 iter 60 value 103.392141 iter 70 value 101.972038 iter 80 value 101.364064 iter 90 value 100.861907 iter 100 value 100.288004 final value 100.288004 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 142.375542 iter 10 value 117.617681 iter 20 value 109.388008 iter 30 value 107.032126 iter 40 value 106.361445 iter 50 value 105.365128 iter 60 value 104.943703 iter 70 value 104.832423 iter 80 value 104.768782 iter 90 value 104.324838 iter 100 value 102.614584 final value 102.614584 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 141.612782 iter 10 value 118.033967 iter 20 value 111.537281 iter 30 value 108.510504 iter 40 value 104.912811 iter 50 value 103.672230 iter 60 value 103.020930 iter 70 value 102.426428 iter 80 value 101.694250 iter 90 value 101.315819 iter 100 value 100.996064 final value 100.996064 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 166.866404 iter 10 value 119.260361 iter 20 value 117.395310 iter 30 value 111.817001 iter 40 value 111.494314 iter 50 value 109.571855 iter 60 value 104.610929 iter 70 value 104.197474 iter 80 value 104.042405 iter 90 value 103.864601 iter 100 value 103.513753 final value 103.513753 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Fri May 31 07:30:20 2024 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 46.93 1.75 48.17
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 31.99 | 1.67 | 33.78 | |
FreqInteractors | 0.30 | 0.03 | 0.35 | |
calculateAAC | 0.05 | 0.00 | 0.05 | |
calculateAutocor | 0.42 | 0.06 | 0.50 | |
calculateCTDC | 0.08 | 0.00 | 0.08 | |
calculateCTDD | 0.64 | 0.00 | 0.64 | |
calculateCTDT | 0.32 | 0.00 | 0.33 | |
calculateCTriad | 0.36 | 0.03 | 0.39 | |
calculateDC | 0.07 | 0.04 | 0.09 | |
calculateF | 0.43 | 0.00 | 0.44 | |
calculateKSAAP | 0.13 | 0.00 | 0.12 | |
calculateQD_Sm | 2.26 | 0.25 | 2.52 | |
calculateTC | 1.63 | 0.10 | 1.73 | |
calculateTC_Sm | 0.39 | 0.00 | 0.39 | |
corr_plot | 31.84 | 1.35 | 33.19 | |
enrichfindP | 0.52 | 0.14 | 12.65 | |
enrichfind_hp | 0.12 | 0.00 | 1.07 | |
enrichplot | 0.36 | 0.00 | 0.36 | |
filter_missing_values | 0 | 0 | 0 | |
getFASTA | 0.00 | 0.04 | 2.18 | |
getHPI | 0 | 0 | 0 | |
get_negativePPI | 0 | 0 | 0 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0 | 0 | 0 | |
plotPPI | 0.09 | 0.00 | 0.12 | |
pred_ensembel | 13.85 | 0.67 | 10.82 | |
var_imp | 31.70 | 1.59 | 33.29 | |