Back to Multiple platform build/check report for BioC 3.9
ABCDEFGH[I]JKLMNOPQRSTUVWXYZ

INSTALL report for ideal on tokay2

This page was generated on 2019-10-16 12:38:26 -0400 (Wed, 16 Oct 2019).

Package 793/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ideal 1.8.1
Federico Marini
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/ideal
Branch: RELEASE_3_9
Last Commit: 80fda76
Last Changed Date: 2019-08-16 09:42:46 -0400 (Fri, 16 Aug 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ideal
Version: 1.8.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ideal_1.8.1.tar.gz && rm -rf ideal.buildbin-libdir && mkdir ideal.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ideal.buildbin-libdir ideal_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ideal_1.8.1.zip && rm ideal_1.8.1.tar.gz ideal_1.8.1.zip
StartedAt: 2019-10-15 21:05:10 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 21:06:57 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 106.9 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ideal_1.8.1.tar.gz && rm -rf ideal.buildbin-libdir && mkdir ideal.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ideal.buildbin-libdir ideal_1.8.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ideal_1.8.1.zip && rm ideal_1.8.1.tar.gz ideal_1.8.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 3740k  100 3740k    0     0  41.1M      0 --:--:-- --:--:-- --:--:-- 44.5M

install for i386

* installing *source* package 'ideal' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** help
*** installing help indices
  converting help for package 'ideal'
    finding HTML links ... done
    deseqresult2DEgenes                     html  
    finding level-2 HTML links ... done

    deseqresult2tbl                         html  
    ggplotCounts                            html  
    goseqTable                              html  
    ideal-pkg                               html  
    ideal                                   html  
    plot_ma                                 html  
    plot_volcano                            html  
    read_gmt                                html  
    sepguesser                              html  
    sig_heatmap                             html  
    wrapup_for_iSEE                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** testing if installed package can be loaded from final location

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ideal' ...
** testing if installed package can be loaded

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
* MD5 sums
packaged installation of 'ideal' as ideal_1.8.1.zip
* DONE (ideal)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'ideal' successfully unpacked and MD5 sums checked