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INSTALL report for viper on tokay2

This page was generated on 2019-04-09 12:18:08 -0400 (Tue, 09 Apr 2019).

Package 1677/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
viper 1.17.1
Mariano J Alvarez
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/viper
Branch: master
Last Commit: cbd25c6
Last Changed Date: 2019-02-26 12:57:07 -0400 (Tue, 26 Feb 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  ERROR  OK 

Summary

Package: viper
Version: 1.17.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/viper_1.17.1.tar.gz && rm -rf viper.buildbin-libdir && mkdir viper.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=viper.buildbin-libdir viper_1.17.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL viper_1.17.1.zip && rm viper_1.17.1.tar.gz viper_1.17.1.zip
StartedAt: 2019-04-08 19:01:12 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 19:01:57 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 44.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/viper_1.17.1.tar.gz && rm -rf viper.buildbin-libdir && mkdir viper.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=viper.buildbin-libdir viper_1.17.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL viper_1.17.1.zip && rm viper_1.17.1.tar.gz viper_1.17.1.zip
###
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install for i386

* installing *source* package 'viper' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'viper'
    finding HTML links ... done
    aREA                                    html  
    aecdf                                   html  
    approxk2d                               html  
    aracne2regulon                          html  
    aracne2regulon4cnv                      html  
    as.dist.signatureDistance               html  
    bootstrapTtest-methods                  html  
    bootstrapViper                          html  
    bootstrapmsviper                        html  
    comNames                                html  
    distMode                                html  
    fcvarna                                 html  
    filterCV-methods                        html  
    filterColMatrix                         html  
    filterRowMatrix                         html  
    frcv                                    html  
    frvarna                                 html  
    groupPwea3                              html  
    integrateSignatures                     html  
    ledge                                   html  
    loadExpset                              html  
    msviper-class                           html  
    msviper                                 html  
    msviperAnnot                            html  
    msviperClass                            html  
    msviperCombinatorial                    html  
    msviperSynergy                          html  
    plot.msviper                            html  
    pruneRegulon                            html  
    pwea3NULLf                              html  
    pwea3NULLgroups                         html  
    regulon-class                           html  
    rowTtest-methods                        html  
    scale.signatureDistance                 html  
    scaleGroups                             html  
    shadow                                  html  
    shadowRegulon                           html  
    sigT                                    html  
    signatureDistance-class                 html  
    signatureDistance                       html  
    summary.msviper                         html  
    ttestNull-methods                       html  
    viper                                   html  
    viperRPT                                html  
    viperSignature-class                    html  
    viperSignature-methods                  html  
    viperSimilarity                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'viper' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'viper' as viper_1.17.1.zip
* DONE (viper)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'viper' successfully unpacked and MD5 sums checked