Back to Multiple platform build/check report for BioC 3.9
ABCDEFGHIJKLMNOPQRSTU[V]WXYZ

BUILD report for variancePartition on merida2

This page was generated on 2019-04-09 13:31:52 -0400 (Tue, 09 Apr 2019).

Package 1668/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
variancePartition 1.13.6
Gabriel E. Hoffman
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/variancePartition
Branch: master
Last Commit: 9b09895
Last Changed Date: 2019-03-20 14:51:09 -0400 (Wed, 20 Mar 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK [ OK ] OK  OK 

Summary

Package: variancePartition
Version: 1.13.6
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data variancePartition
StartedAt: 2019-04-08 21:15:10 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 21:43:19 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 1689.2 seconds
RetCode: 0
Status:  OK 
PackageFile: variancePartition_1.13.6.tar.gz
PackageFileSize: 27.32 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data variancePartition
###
##############################################################################
##############################################################################


* checking for file ‘variancePartition/DESCRIPTION’ ... OK
* preparing ‘variancePartition’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/contrast.combine_e5a3f6487c68f56332096d83b3485b6e.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/contrast.combine_e5a3f6487c68f56332096d83b3485b6e.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/contrast_38cbe828b5d3a58ae140c0902bb7bf82.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/contrast_38cbe828b5d3a58ae140c0902bb7bf82.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/define_795686d282a163201bb0a345aa552c8f.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/define_795686d282a163201bb0a345aa552c8f.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/dupCor_54199b6594278a6e7483db18e7f029ec.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/dupCor_54199b6594278a6e7483db18e7f029ec.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/kable_73690b8289847595acb4b12e17aaecf7.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/kable_73690b8289847595acb4b12e17aaecf7.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/kr_0bf46defecee4cfe7420f33f83637f67.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/kr_0bf46defecee4cfe7420f33f83637f67.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/lmm_04e691fe74396ed09a8a9d3864668582.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/lmm_04e691fe74396ed09a8a9d3864668582.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/preprocess_70c0ab0cdd31f9add7058dc9aadf1ce7.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/preprocess_70c0ab0cdd31f9add7058dc9aadf1ce7.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/sessionInfo_06988ef454873f90fa6a89a940f472fc.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/sessionInfo_06988ef454873f90fa6a89a940f472fc.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/vp_08396731110d32b0ea76ebb84dc3732b.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'variancePartition/vignettes/dream_cache/html/vp_08396731110d32b0ea76ebb84dc3732b.rdx'
* building 'variancePartition_1.13.6.tar.gz'