Back to Multiple platform build/check report for BioC 3.9
ABCDEFGHIJKLMNO[P]QRSTUVWXYZ

INSTALL report for plw on malbec2

This page was generated on 2019-04-09 11:26:09 -0400 (Tue, 09 Apr 2019).

Package 1201/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
plw 1.43.0
Magnus Astrand
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/plw
Branch: master
Last Commit: 3524ffb
Last Changed Date: 2018-10-30 11:54:27 -0400 (Tue, 30 Oct 2018)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: plw
Version: 1.43.0
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL plw
StartedAt: 2019-04-08 18:11:39 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 18:11:46 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 7.3 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL plw
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘plw’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG   -I/usr/local/include  -fpic  -g -O2  -Wall -c SpecialFunctions.c -o SpecialFunctions.o
SpecialFunctions.c: In function ‘getPosteriorProbsAndSigmaHatStrata0’:
SpecialFunctions.c:154:20: warning: variable ‘s2’ set but not used [-Wunused-but-set-variable]
  double kk,C,s0,s1,s2,temp0,aa;
                    ^˜
SpecialFunctions.c:154:17: warning: variable ‘s1’ set but not used [-Wunused-but-set-variable]
  double kk,C,s0,s1,s2,temp0,aa;
                 ^˜
SpecialFunctions.c:154:14: warning: variable ‘s0’ set but not used [-Wunused-but-set-variable]
  double kk,C,s0,s1,s2,temp0,aa;
              ^˜
gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG   -I/usr/local/include  -fpic  -g -O2  -Wall -c SpecialOptim.c -o SpecialOptim.o
gcc -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o plw.so SpecialFunctions.o SpecialOptim.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-plw/00new/plw/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (plw)