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INSTALL report for mixOmics on merida2

This page was generated on 2019-04-09 13:37:58 -0400 (Tue, 09 Apr 2019).

Package 1006/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mixOmics 6.7.1
Kim-Anh Le Cao
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/mixOmics
Branch: master
Last Commit: 6eb1ba6
Last Changed Date: 2019-03-28 21:09:37 -0400 (Thu, 28 Mar 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64 [ OK ] ERROR  skipped  skipped 

Summary

Package: mixOmics
Version: 6.7.1
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL mixOmics
StartedAt: 2019-04-08 18:22:54 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 18:23:49 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 54.9 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL mixOmics
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* installing to library ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library’
* installing *source* package ‘mixOmics’ ...
files ‘R/MCVfold.R’, ‘R/multilevel.R’, ‘R/plotContrib.R’, ‘R/scatterutil.R’, ‘R/tune.multilevel.R’, ‘man/multilevel.Rd’, ‘man/plotContrib.Rd’, ‘man/scatterutil.Rd’, ‘man/tune.multilevel.Rd’ are missing
files ‘DESCRIPTION’, ‘NAMESPACE’, ‘NEWS’, ‘R/LOGOCV.R’, ‘R/bin.color.R’, ‘R/block.pls.R’, ‘R/block.plsda.R’, ‘R/block.spls.R’, ‘R/block.splsda.R’, ‘R/check_entry.R’, ‘R/cim.R’, ‘R/cimDiablo.R’, ‘R/circosPlot.R’, ‘R/color.GreenRed.R’, ‘R/color.jet.R’, ‘R/color.mixo.R’, ‘R/color.spectral.R’, ‘R/explained_variance.R’, ‘R/ica.def.par.R’, ‘R/image.tune.rcc.R’, ‘R/imageMap.R’, ‘R/imgCor.R’, ‘R/internal_graphicModule.R’, ‘R/internal_mint.block.R’, ‘R/internal_mint.block_helpers.R’, ‘R/internal_predict.DA.R’, ‘R/internal_wrapper.mint.R’, ‘R/internal_wrapper.mint.block.R’, ‘R/mat.rank.R’, ‘R/mint.block.pls.R’, ‘R/mint.block.plsda.R’, ‘R/mint.block.spls.R’, ‘R/mint.block.splsda.R’, ‘R/mint.pls.R’, ‘R/mint.plsda.R’, ‘R/mint.spls.R’, ‘R/mint.splsda.R’, ‘R/mixOmics.R’, ‘R/network.R’, ‘R/nipals.R’, ‘R/pca.R’, ‘R/pcasvd.R’, ‘R/perf.R’, ‘R/perf.diablo.R’, ‘R/perf.mint.splsda.R’, ‘R/plot.pca.R’, ‘R/plot.perf.R’, ‘R/plotArrow.R’, ‘R/plotDiablo.R’, ‘R/plotIndiv.R’, ‘R/plotIndiv.mint.R’, ‘R/plotIndiv.pca.R’, ‘R/plotIndiv.pls.R’, ‘R/plotIndiv.sgcca.R’, ‘R/plotLoadings.R’, ‘R/plotLoadings.mint.spls.R’, ‘R/plotLoadings.mint.splsda.R’, ‘R/plotLoadings.spls.R’, ‘R/plotLoadings.splsda.R’, ‘R/plotVar.R’, ‘R/pls.R’, ‘R/plsda.R’, ‘R/predict.mint.block.pls.R’, ‘R/print.methods.R’, ‘R/selectVar.R’, ‘R/sipca.R’, ‘R/spca.R’, ‘R/spls.R’, ‘R/splsda.R’, ‘R/summary.R’, ‘R/tune.R’, ‘R/tune.mint.splsda.R’, ‘R/tune.rcc.R’, ‘R/tune.splsda.R’, ‘R/tune.splslevel.R’, ‘R/vip.R’, ‘R/wrapper.ilr.R’, ‘R/wrapper.rgcca.R’, ‘R/wrapper.sgcca.R’, ‘R/zzz.R’, ‘data/Koren.16S.rda’, ‘data/datalist’, ‘data/diverse.16S.rda’, ‘data/vac18.simulated.rda’, ‘man/Koren.16S.Rd’, ‘man/block.pls.Rd’, ‘man/block.plsda.Rd’, ‘man/block.spls.Rd’, ‘man/block.splsda.Rd’, ‘man/breast.TCGA.Rd’, ‘man/breast.tumors.Rd’, ‘man/cim.Rd’, ‘man/cimDiablo.Rd’, ‘man/circosPlot.Rd’, ‘man/colors.Rd’, ‘man/diverse.16S.Rd’, ‘man/estim.regul.Rd’, ‘man/explained_variance.Rd’, ‘man/image.estim.regul.Rd’, ‘man/image.tune.rcc.Rd’, ‘man/imgCor.Rd’, ‘man/ipca.Rd’, ‘man/linnerud.Rd’, ‘man/liver.toxicity.Rd’, ‘man/logratio.transfo.Rd’, ‘man/map.Rd’, ‘man/mat.rank.Rd’, ‘man/mint.block.pls.Rd’, ‘man/mint.block.plsda.Rd’, ‘man/mint.block.spls.Rd’, ‘man/mint.block.splsda.Rd’, ‘man/mint.pls.Rd’, ‘man/mint.plsda.Rd’, ‘man/mint.spls.Rd’, ‘man/mint.splsda.Rd’, ‘man/mixOmics.Rd’, ‘man/multidrug.Rd’, ‘man/nearZeroVar.Rd’, ‘man/network.Rd’, ‘man/nipals.Rd’, ‘man/nutrimouse.Rd’, ‘man/pca.Rd’, ‘man/pcatune.Rd’, ‘man/perf.Rd’, ‘man/plot.perf.Rd’, ‘man/plot.rcc.Rd’, ‘man/plotArrow.Rd’, ‘man/plotDiablo.Rd’, ‘man/plotIndiv.Rd’, ‘man/plotLoadings.Rd’, ‘man/plotVar.Rd’, ‘man/pls.Rd’, ‘man/plsda.Rd’, ‘man/predict.Rd’, ‘man/print.methods.Rd’, ‘man/rcc.Rd’, ‘man/selectVar.Rd’, ‘man/sipca.Rd’, ‘man/spca.Rd’, ‘man/spls.Rd’, ‘man/splsda.Rd’, ‘man/srbct.Rd’, ‘man/stemcells.Rd’, ‘man/study_split.Rd’, ‘man/summary.Rd’, ‘man/tune.Rd’, ‘man/tune.mint.splsda.Rd’, ‘man/tune.pca.Rd’, ‘man/tune.rcc.Rd’, ‘man/tune.splsda.Rd’, ‘man/unmap.Rd’, ‘man/vac18.Rd’, ‘man/vac18.simulated.Rd’, ‘man/vip.Rd’, ‘man/withinVariation.Rd’, ‘man/wrapper.rgcca.Rd’, ‘man/wrapper.sgcca.Rd’, ‘man/yeast.Rd’ have the wrong MD5 checksums
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (mixOmics)