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INSTALL report for mitoODE on tokay2

This page was generated on 2019-04-09 12:05:43 -0400 (Tue, 09 Apr 2019).

Package 1005/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mitoODE 1.21.1
Gregoire Pau
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/mitoODE
Branch: master
Last Commit: 921a162
Last Changed Date: 2019-01-04 13:39:35 -0400 (Fri, 04 Jan 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: mitoODE
Version: 1.21.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/mitoODE_1.21.1.tar.gz && rm -rf mitoODE.buildbin-libdir && mkdir mitoODE.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mitoODE.buildbin-libdir mitoODE_1.21.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL mitoODE_1.21.1.zip && rm mitoODE_1.21.1.tar.gz mitoODE_1.21.1.zip
StartedAt: 2019-04-08 18:59:33 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 18:59:55 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 21.3 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/mitoODE_1.21.1.tar.gz && rm -rf mitoODE.buildbin-libdir && mkdir mitoODE.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mitoODE.buildbin-libdir mitoODE_1.21.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL mitoODE_1.21.1.zip && rm mitoODE_1.21.1.tar.gz mitoODE_1.21.1.zip
###
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install for i386

* installing *source* package 'mitoODE' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c rksolve.c -o rksolve.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o mitoODE.dll tmp.def rksolve.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/mitoODE.buildbin-libdir/00LOCK-mitoODE/00new/mitoODE/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'mitoODE'
    finding HTML links ... done
    figures                                 html  
    mitoODE                                 html  
    plotfit                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'mitoODE' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c rksolve.c -o rksolve.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o mitoODE.dll tmp.def rksolve.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/mitoODE.buildbin-libdir/mitoODE/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'mitoODE' as mitoODE_1.21.1.zip
* DONE (mitoODE)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'mitoODE' successfully unpacked and MD5 sums checked