Back to Multiple platform build/check report for BioC 3.9
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

BUILD BIN report for miRSM on tokay2

This page was generated on 2019-04-09 12:41:42 -0400 (Tue, 09 Apr 2019).

Package 999/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
miRSM 1.1.3
Junpeng Zhang
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/miRSM
Branch: master
Last Commit: 9133af4
Last Changed Date: 2019-03-07 19:49:58 -0400 (Thu, 07 Mar 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  ERROR  ERROR  skipped  skipped 

Summary

Package: miRSM
Version: 1.1.3
Command: rm -rf miRSM.buildbin-libdir && mkdir miRSM.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=miRSM.buildbin-libdir miRSM_1.1.3.tar.gz
StartedAt: 2019-04-09 08:29:31 -0400 (Tue, 09 Apr 2019)
EndedAt: 2019-04-09 08:31:10 -0400 (Tue, 09 Apr 2019)
EllapsedTime: 98.9 seconds
RetCode: 0
Status:  OK  
PackageFile: miRSM_1.1.3.zip
PackageFileSize: 955.6 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf miRSM.buildbin-libdir && mkdir miRSM.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=miRSM.buildbin-libdir miRSM_1.1.3.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'miRSM' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c complex.c -o complex.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c registerDynamicSymbol.c -o registerDynamicSymbol.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o miRSM.dll tmp.def complex.o registerDynamicSymbol.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/miRSM.buildbin-libdir/00LOCK-miRSM/00new/miRSM/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'miRSM'
    finding HTML links ... done
    ceRExp                                  html  
    cor_binary                              html  
    mRExp                                   html  
    miRExp                                  html  
    miRSM                                   html  
    miRTarget                               html  
    module_FA                               html  
    module_GFA                              html  
    module_NMF                              html  
    module_ProNet                           html  
    module_WGCNA                            html  
    module_biclust                          html  
    module_clust                            html  
    module_igraph                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'miRSM' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c complex.c -o complex.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c registerDynamicSymbol.c -o registerDynamicSymbol.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o miRSM.dll tmp.def complex.o registerDynamicSymbol.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/miRSM.buildbin-libdir/miRSM/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'miRSM' as miRSM_1.1.3.zip
* DONE (miRSM)