Package: ivygapSE

Version: 1.5.1

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ivygapSE_1.5.1.tar.gz && rm -rf ivygapSE.buildbin-libdir && mkdir ivygapSE.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ivygapSE.buildbin-libdir ivygapSE_1.5.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ivygapSE_1.5.1.zip && rm ivygapSE_1.5.1.tar.gz ivygapSE_1.5.1.zip

StartedAt: 2019-04-08 19:59:54 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 20:01:08 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 74.7 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ivygapSE_1.5.1.tar.gz && rm -rf ivygapSE.buildbin-libdir && mkdir ivygapSE.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ivygapSE.buildbin-libdir ivygapSE_1.5.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ivygapSE_1.5.1.zip && rm ivygapSE_1.5.1.tar.gz ivygapSE_1.5.1.zip
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install for i386

* installing *source* package 'ivygapSE' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ivygapSE'
    finding HTML links ... done
    exprByType                              html  
    getRefLimma                             html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpwza1dK/R.INSTALL1dec47e537f4/ivygapSE/man/getRefLimma.Rd:10: file link 'MArrayLM-class' in package 'limma' does not exist and so has been treated as a topic
    helper                                  html  
    imgSupport                              html  
    ivyGlimpse                              html  
    ivySE                                   html  
    makeGeneSets                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ivygapSE' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ivygapSE' as ivygapSE_1.5.1.zip
* DONE (ivygapSE)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'ivygapSE' successfully unpacked and MD5 sums checked