Mike Jiang
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/ggcyto |
| Branch: master |
| Last Commit: d28ee68 |
| Last Changed Date: 2019-01-18 19:02:03 -0400 (Fri, 18 Jan 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 12:25:30 -0400 (Tue, 09 Apr 2019).
| Package 667/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ggcyto 1.11.4 Mike Jiang
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | ERROR | OK | |||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | ERROR | OK |
| Package: ggcyto |
| Version: 1.11.4 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ggcyto_1.11.4.tar.gz && rm -rf ggcyto.buildbin-libdir && mkdir ggcyto.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ggcyto.buildbin-libdir ggcyto_1.11.4.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ggcyto_1.11.4.zip && rm ggcyto_1.11.4.tar.gz ggcyto_1.11.4.zip |
| StartedAt: 2019-04-08 19:40:25 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 19:41:58 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 93.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ggcyto_1.11.4.tar.gz && rm -rf ggcyto.buildbin-libdir && mkdir ggcyto.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ggcyto.buildbin-libdir ggcyto_1.11.4.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ggcyto_1.11.4.zip && rm ggcyto_1.11.4.tar.gz ggcyto_1.11.4.zip
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install for i386
* installing *source* package 'ggcyto' ...
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for '%+%' from package 'ggplot2' in package 'ggcyto'
** help
Registered S3 methods overwritten by 'ggplot2':
method from
[.quosures rlang
c.quosures rlang
print.quosures rlang
*** installing help indices
converting help for package 'ggcyto'
finding HTML links ... done
as.ggplot html
autoplot html
finding level-2 HTML links ... done
axis_x_inverse_trans html
compute_stats html
flowCore_asinht_trans html
fortify.ellipsoidGate html
fortify.filterList html
fortify.flowSet html
fortify.polygonGate html
fortify.rectangleGate html
fortify_fs html
geom_gate html
geom_hvline html
geom_overlay html
geom_stats html
getFlowFrame html
ggcyto.GatingSet html
ggcyto html
ggcyto.flowSet html
ggcyto_GatingSet_add html
ggcyto_arrange html
ggcyto_flowSet_add html
ggcyto_par_default html
ggcyto_par_set html
is.ggcyto html
is.ggcyto_flowSet html
is.ggcyto_par html
labs_cyto html
marginalFilter html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpaeBtjY/R.INSTALL16dc54fa38b0/ggcyto/man/marginalFilter.Rd:14: file link 'boundaryFilter' in package 'flowCore' does not exist and so has been treated as a topic
merge.quad.gates html
plus-.ggcyto_GatingLayout html
print.ggcyto html
print.ggcyto_GatingLayout html
replace_data html
scale_x_flowCore_fasinh html
scale_x_flowJo_biexp html
scale_x_flowJo_fasinh html
scale_x_logicle html
stat_position html
transform-gate html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ggcyto' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ggcyto' as ggcyto_1.11.4.zip
* DONE (ggcyto)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'ggcyto' successfully unpacked and MD5 sums checked