Package: ddPCRclust

Version: 1.3.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ddPCRclust_1.3.0.tar.gz && rm -rf ddPCRclust.buildbin-libdir && mkdir ddPCRclust.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ddPCRclust.buildbin-libdir ddPCRclust_1.3.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ddPCRclust_1.3.0.zip && rm ddPCRclust_1.3.0.tar.gz ddPCRclust_1.3.0.zip

StartedAt: 2019-04-08 20:28:34 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 20:30:04 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 89.7 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ddPCRclust_1.3.0.tar.gz && rm -rf ddPCRclust.buildbin-libdir && mkdir ddPCRclust.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ddPCRclust.buildbin-libdir ddPCRclust_1.3.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ddPCRclust_1.3.0.zip && rm ddPCRclust_1.3.0.tar.gz ddPCRclust_1.3.0.zip
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install for i386

* installing *source* package 'ddPCRclust' ...
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'flowCore::plot' by 'graphics::plot' when loading 'flowDensity'
** help
*** installing help indices
  converting help for package 'ddPCRclust'
    finding HTML links ... done
    calculateCPDs                           html  
    createEnsemble                          html  
    finding level-2 HTML links ... done

    ddPCRclust                              html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpucaIPY/R.INSTALL271078ef1816/ddPCRclust/man/ddPCRclust.Rd:64: file link 'parallel' in package 'parallel' does not exist and so has been treated as a topic
    exportPlots                             html  
    exportToCSV                             html  
    exportToExcel                           html  
    readFiles                               html  
    readTemplate                            html  
    runDensity                              html  
    runPeaks                                html  
    runSam                                  html  
    shearCorrection                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'flowCore::plot' by 'graphics::plot' when loading 'flowDensity'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'flowCore::plot' by 'graphics::plot' when loading 'flowDensity'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ddPCRclust' ...
** testing if installed package can be loaded
Warning: replacing previous import 'flowCore::plot' by 'graphics::plot' when loading 'flowDensity'
* MD5 sums
packaged installation of 'ddPCRclust' as ddPCRclust_1.3.0.zip
* DONE (ddPCRclust)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'ddPCRclust' successfully unpacked and MD5 sums checked