Package: cpvSNP

Version: 1.15.0

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/cpvSNP_1.15.0.tar.gz && rm -rf cpvSNP.buildbin-libdir && mkdir cpvSNP.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cpvSNP.buildbin-libdir cpvSNP_1.15.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL cpvSNP_1.15.0.zip && rm cpvSNP_1.15.0.tar.gz cpvSNP_1.15.0.zip

StartedAt: 2019-04-08 20:05:44 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 20:06:55 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 71.3 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/cpvSNP_1.15.0.tar.gz && rm -rf cpvSNP.buildbin-libdir && mkdir cpvSNP.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cpvSNP.buildbin-libdir cpvSNP_1.15.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL cpvSNP_1.15.0.zip && rm cpvSNP_1.15.0.tar.gz cpvSNP_1.15.0.zip
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install for i386

* installing *source* package 'cpvSNP' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'cpvSNP'
    finding HTML links ... done
    GLOSSIResult-class                      html  
    GLOSSIResultCollection-class            html  
    GeneSetResult-class                     html  
    GeneSetResultCollection-class           html  
    VEGASResult-class                       html  
    VEGASResultCollection-class             html  
    assocPvalBySetPlot                      html  
    createArrayData                         html  
    degreesOfFreedom-method                 html  
    exampleArrayData                        html  
    geneSetAnalysis                         html  
    geneSetName-methods                     html  
    geneSets                                html  
    geneToSNPList                           html  
    glossi                                  html  
    glossiMarginal                          html  
    pValue-method                           html  
    plotPvals                               html  
    show-methods                            html  
    simulate_chisq                          html  
    simulatedStats-method                   html  
    statistic-methods                       html  
    vegas                                   html  
    vegasMarginal                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'cpvSNP' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cpvSNP' as cpvSNP_1.15.0.zip
* DONE (cpvSNP)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'cpvSNP' successfully unpacked and MD5 sums checked