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INSTALL report for coRdon on tokay2

This page was generated on 2019-04-09 12:41:13 -0400 (Tue, 09 Apr 2019).

Package 340/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
coRdon 1.1.3
Anamaria Elek
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/coRdon
Branch: master
Last Commit: 79034ea
Last Changed Date: 2019-01-02 10:39:33 -0400 (Wed, 02 Jan 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: coRdon
Version: 1.1.3
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/coRdon_1.1.3.tar.gz && rm -rf coRdon.buildbin-libdir && mkdir coRdon.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=coRdon.buildbin-libdir coRdon_1.1.3.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL coRdon_1.1.3.zip && rm coRdon_1.1.3.tar.gz coRdon_1.1.3.zip
StartedAt: 2019-04-08 19:12:58 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 19:13:48 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 49.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/coRdon_1.1.3.tar.gz && rm -rf coRdon.buildbin-libdir && mkdir coRdon.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=coRdon.buildbin-libdir coRdon_1.1.3.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL coRdon_1.1.3.zip && rm coRdon_1.1.3.tar.gz coRdon_1.1.3.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  320k  100  320k    0     0   992k      0 --:--:-- --:--:-- --:--:-- 1014k

install for i386

* installing *source* package 'coRdon' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'coRdon'
    finding HTML links ... done
    HD59                                    html  
    HD59_KO                                 html  
    HD59_PATHWAYS                           html  
    LD94                                    html  
    LD94_KO                                 html  
    LD94_PATHWAYS                           html  
    RPKOs                                   html  
    bplot                                   html  
    coRdon                                  html  
    codonTable-class                        html  
    codonUsage-expressivity                 html  
    codonUsage                              html  
    crossTab-class                          html  
    enrichBarplot                           html  
    enrichMAplot                            html  
    enrichMatrix                            html  
    enrichment                              html  
    genCode-class                           html  
    intraBplot                              html  
    length-codonTable                       html  
    length-crossTab                         html  
    readSet                                 html  
    reduceCrossTab                          html  
    show-codonTable                         html  
    show-crossTab                           html  
    subset                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'coRdon' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'coRdon' as coRdon_1.1.3.zip
* DONE (coRdon)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'coRdon' successfully unpacked and MD5 sums checked