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INSTALL report for clstutils on tokay2

This page was generated on 2019-04-09 11:59:05 -0400 (Tue, 09 Apr 2019).

Package 284/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
clstutils 1.31.0
Noah Hoffman
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/clstutils
Branch: master
Last Commit: 5f56281
Last Changed Date: 2018-10-30 11:54:29 -0400 (Tue, 30 Oct 2018)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK 

Summary

Package: clstutils
Version: 1.31.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/clstutils_1.31.0.tar.gz && rm -rf clstutils.buildbin-libdir && mkdir clstutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clstutils.buildbin-libdir clstutils_1.31.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL clstutils_1.31.0.zip && rm clstutils_1.31.0.tar.gz clstutils_1.31.0.zip
StartedAt: 2019-04-08 18:58:52 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 18:59:30 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 37.8 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/clstutils_1.31.0.tar.gz && rm -rf clstutils.buildbin-libdir && mkdir clstutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clstutils.buildbin-libdir clstutils_1.31.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL clstutils_1.31.0.zip && rm clstutils_1.31.0.tar.gz clstutils_1.31.0.zip
###
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100 2330k  100 2330k    0     0  20.8M      0 --:--:-- --:--:-- --:--:-- 22.3M

install for i386

* installing *source* package 'clstutils' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'clstutils'
    finding HTML links ... done
    classifyPlacements                      html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp4Aklbr/R.INSTALL158415ab3ccf/clstutils/man/classifyPlacements.Rd:31: file link 'classifyIter' in package 'clst' does not exist and so has been treated as a topic
    clstutils-package                       html  
    finding level-2 HTML links ... done

    findOutliers                            html  
    maxDists                                html  
    prettyTree                              html  
    refpkgContents                          html  
    seqdat                                  html  
    seqs                                    html  
    taxonomyFromRefpkg                      html  
    treeDists                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'clstutils' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'clstutils' as clstutils_1.31.0.zip
* DONE (clstutils)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'clstutils' successfully unpacked and MD5 sums checked