Back to Multiple platform build/check report for BioC 3.9
ABCDEFGHIJKLMNOPQRSTUVW[X]YZ

INSTALL report for XBSeq on tokay2

This page was generated on 2019-04-09 12:24:28 -0400 (Tue, 09 Apr 2019).

Package 1689/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
XBSeq 1.15.1
Yuanhang Liu
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/XBSeq
Branch: master
Last Commit: 1b1174c
Last Changed Date: 2019-01-04 13:53:25 -0400 (Fri, 04 Jan 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: XBSeq
Version: 1.15.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/XBSeq_1.15.1.tar.gz && rm -rf XBSeq.buildbin-libdir && mkdir XBSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=XBSeq.buildbin-libdir XBSeq_1.15.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL XBSeq_1.15.1.zip && rm XBSeq_1.15.1.tar.gz XBSeq_1.15.1.zip
StartedAt: 2019-04-08 20:18:58 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 20:20:11 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 72.3 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/XBSeq_1.15.1.tar.gz && rm -rf XBSeq.buildbin-libdir && mkdir XBSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=XBSeq.buildbin-libdir XBSeq_1.15.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL XBSeq_1.15.1.zip && rm XBSeq_1.15.1.tar.gz XBSeq_1.15.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  867k  100  867k    0     0  13.1M      0 --:--:-- --:--:-- --:--:-- 14.8M

install for i386

* installing *source* package 'XBSeq' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'XBSeq'
    finding HTML links ... done
    ExampleData                             html  
    MAplot                                  html  
    XBSeq-package                           html  
    XBSeq                                   html  
    XBSeqDataSet-class                      html  
    finding level-2 HTML links ... done

    XBSeqTest                               html  
    XBplot                                  html  
    apaUsage                                html  
    conditions                              html  
    counts                                  html  
    dispEst                                 html  
    dispTable                               html  
    estimateRealCount                       html  
    estimateSCV                             html  
    fitInfo                                 html  
    getSignalVars                           html  
    plotSCVEsts                             html  
** building package indices
** installing vignettes
   'XBSeq.Rmd' using 'UTF-8' 
Warning in res[i] <- withCallingHandlers(if (tangle) process_tangle(group) else process_group(group),  :
  number of items to replace is not a multiple of replacement length
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'XBSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'XBSeq' as XBSeq_1.15.1.zip
* DONE (XBSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'XBSeq' successfully unpacked and MD5 sums checked