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INSTALL report for TFEA.ChIP on tokay2

This page was generated on 2019-04-09 12:35:38 -0400 (Tue, 09 Apr 2019).

Package 1606/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TFEA.ChIP 1.3.5
Laura Puente Santamaría
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/TFEA.ChIP
Branch: master
Last Commit: 390b328
Last Changed Date: 2019-04-05 09:10:31 -0400 (Fri, 05 Apr 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  ERROR  OK 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  ERROR  OK 

Summary

Package: TFEA.ChIP
Version: 1.3.5
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/TFEA.ChIP_1.3.5.tar.gz && rm -rf TFEA.ChIP.buildbin-libdir && mkdir TFEA.ChIP.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TFEA.ChIP.buildbin-libdir TFEA.ChIP_1.3.5.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL TFEA.ChIP_1.3.5.zip && rm TFEA.ChIP_1.3.5.tar.gz TFEA.ChIP_1.3.5.zip
StartedAt: 2019-04-08 20:04:13 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 20:05:32 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 78.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/TFEA.ChIP_1.3.5.tar.gz && rm -rf TFEA.ChIP.buildbin-libdir && mkdir TFEA.ChIP.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TFEA.ChIP.buildbin-libdir TFEA.ChIP_1.3.5.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL TFEA.ChIP_1.3.5.zip && rm TFEA.ChIP_1.3.5.tar.gz TFEA.ChIP_1.3.5.zip
###
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100 3908k  100 3908k    0     0  22.0M      0 --:--:-- --:--:-- --:--:-- 22.8M

install for i386

* installing *source* package 'TFEA.ChIP' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TFEA.ChIP'
    finding HTML links ... done
    ARNT.metadata                           html  
    ARNT.peaks.bed                          html  
    CM_list                                 html  
    DnaseHS_db                              html  
    Entrez.gene.IDs                         html  
    GR2tfbs_db                              html  
    GSEA.result                             html  
    GSEA_ESpermutations                     html  
    GSEA_EnrichmentScore                    html  
    GSEA_run                                html  
    GeneID2entrez                           html  
    Genes.Upreg                             html  
    Mat01                                   html  
    MetaData                                html  
    Select_genes                            html  
    contingency_matrix                      html  
    getCMstats                              html  
    get_LFC_bar                             html  
    get_chip_index                          html  
    gr.list                                 html  
    highlight_TF                            html  
    hypoxia                                 html  
    hypoxia_DESeq                           html  
    log2.FC                                 html  
    makeTFBSmatrix                          html  
    plot_CM                                 html  
    plot_ES                                 html  
    plot_RES                                html  
    preprocessInputData                     html  
    rankTFs                                 html  
    set_user_data                           html  
    stat_mat                                html  
    tfbs.database                           html  
    txt2GR                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TFEA.ChIP' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TFEA.ChIP' as TFEA.ChIP_1.3.5.zip
* DONE (TFEA.ChIP)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'TFEA.ChIP' successfully unpacked and MD5 sums checked