Package: SingleCellExperiment

Version: 1.5.2

Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SingleCellExperiment_1.5.2.tar.gz && rm -rf SingleCellExperiment.buildbin-libdir && mkdir SingleCellExperiment.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SingleCellExperiment.buildbin-libdir SingleCellExperiment_1.5.2.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SingleCellExperiment_1.5.2.zip && rm SingleCellExperiment_1.5.2.tar.gz SingleCellExperiment_1.5.2.zip

StartedAt: 2019-04-08 19:51:53 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 19:52:55 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 62.9 seconds

RetCode: 0

Status:  OK

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SingleCellExperiment_1.5.2.tar.gz && rm -rf SingleCellExperiment.buildbin-libdir && mkdir SingleCellExperiment.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SingleCellExperiment.buildbin-libdir SingleCellExperiment_1.5.2.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SingleCellExperiment_1.5.2.zip && rm SingleCellExperiment_1.5.2.tar.gz SingleCellExperiment_1.5.2.zip
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install for i386

* installing *source* package 'SingleCellExperiment' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SingleCellExperiment'
    finding HTML links ... done
    LEM-combine                             html  
    LEM-getset                              html  
    LEM-misc                                html  
    LEM-subset                              html  
    LinearEmbeddingMatrix                   html  
    SCE-assays                              html  
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpqqZsAV/R.INSTALL16ec7eb57c58/SingleCellExperiment/man/SCE-assays.Rd:59: file link 'assays' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
    SCE-colData                             html  
    finding level-2 HTML links ... done

    SCE-combine                             html  
    SCE-internal                            html  
    SCE-isSpike                             html  
    SCE-misc                                html  
    SCE-reducedDims                         html  
    SCE-sizeFactors                         html  
    SCE-subset                              html  
    SingleCellExperiment                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SingleCellExperiment' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SingleCellExperiment' as SingleCellExperiment_1.5.2.zip
* DONE (SingleCellExperiment)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'SingleCellExperiment' successfully unpacked and MD5 sums checked