Jiadi Zhu
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/SIMD |
| Branch: master |
| Last Commit: 4c741ad |
| Last Changed Date: 2019-01-04 13:50:37 -0400 (Fri, 04 Jan 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 12:41:54 -0400 (Tue, 09 Apr 2019).
| Package 1495/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| SIMD 1.1.1 Jiadi Zhu
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
| Package: SIMD |
| Version: 1.1.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SIMD_1.1.1.tar.gz && rm -rf SIMD.buildbin-libdir && mkdir SIMD.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIMD.buildbin-libdir SIMD_1.1.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SIMD_1.1.1.zip && rm SIMD_1.1.1.tar.gz SIMD_1.1.1.zip |
| StartedAt: 2019-04-08 18:49:29 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 18:50:20 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 50.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/SIMD_1.1.1.tar.gz && rm -rf SIMD.buildbin-libdir && mkdir SIMD.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIMD.buildbin-libdir SIMD_1.1.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL SIMD_1.1.1.zip && rm SIMD_1.1.1.tar.gz SIMD_1.1.1.zip
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install for i386
* installing *source* package 'SIMD' ...
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c pvalueclassify.c -o pvalueclassify.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o SIMD.dll tmp.def init.o pvalueclassify.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/SIMD.buildbin-libdir/00LOCK-SIMD/00new/SIMD/libs/i386
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SIMD'
finding HTML links ... done
EM2_H1ESB1_MeDIP_sigleCpG html
EM2_H1ESB2_MeDIP_sigleCpG html
EM_H1ESB1_MeDIP_sigleCpG html
EMalgorithm html
EMtest html
H1ESB1_MRE_sigleCpG html
H1ESB2_MRE_sigleCpG html
SIMD-package html
all_CpGsite_bin_chr18 html
classifypvalue html
emalgth html
emalgth1 html
probBinom html
three_mre_cpg html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SIMD' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c pvalueclassify.c -o pvalueclassify.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o SIMD.dll tmp.def init.o pvalueclassify.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/SIMD.buildbin-libdir/SIMD/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SIMD' as SIMD_1.1.1.zip
* DONE (SIMD)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'SIMD' successfully unpacked and MD5 sums checked