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INSTALL report for ReportingTools on tokay2

This page was generated on 2019-04-09 12:01:10 -0400 (Tue, 09 Apr 2019).

Package 1330/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ReportingTools 2.23.1
Jason A. Hackney , Gabriel Becker
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/ReportingTools
Branch: master
Last Commit: 279f186
Last Changed Date: 2019-01-04 13:46:42 -0400 (Fri, 04 Jan 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: ReportingTools
Version: 2.23.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ReportingTools_2.23.1.tar.gz && rm -rf ReportingTools.buildbin-libdir && mkdir ReportingTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ReportingTools.buildbin-libdir ReportingTools_2.23.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ReportingTools_2.23.1.zip && rm ReportingTools_2.23.1.tar.gz ReportingTools_2.23.1.zip
StartedAt: 2019-04-08 20:27:25 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 20:30:48 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 203.0 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ReportingTools_2.23.1.tar.gz && rm -rf ReportingTools.buildbin-libdir && mkdir ReportingTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ReportingTools.buildbin-libdir ReportingTools_2.23.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ReportingTools_2.23.1.zip && rm ReportingTools_2.23.1.tar.gz ReportingTools_2.23.1.zip
###
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install for i386

* installing *source* package 'ReportingTools' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for 'objectToHTML' with signature 'object="ggbio"': no definition for class "ggbio"
** help
*** installing help indices
  converting help for package 'ReportingTools'
    finding HTML links ... done
    BaseReportType-class                    html  
    CSVFile-class                           html  
    CSVFile                                 html  
    DataPackage-class                       html  
    DataPackage                             html  
    HTMLReport-class                        html  
    HTMLReport                              html  
    HTMLReportRef-class                     html  
    Link                                    html  
    ReportHandlers-class                    html  
    addReportColumns-methods                html  
    custHeaderPanel                         html  
    filename-methods                        html  
    finish-methods                          html  
    makeDESeqDF                             html  
    mockRnaSeqData                          html  
    objectToHTML-methods                    html  
    publish-methods                         html  
    finding level-2 HTML links ... done

    readReport                              html  
    reporting.theme                         html  
    reporting.theme.alternate               html  
    toReportDF-methods                      html  
    validConnection                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ReportingTools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ReportingTools' as ReportingTools_2.23.1.zip
* DONE (ReportingTools)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'ReportingTools' successfully unpacked and MD5 sums checked