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BUILD report for RMassBank on merida2

This page was generated on 2019-04-09 13:27:23 -0400 (Tue, 09 Apr 2019).

Package 1361/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RMassBank 2.11.2
RMassBank at Eawag
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/RMassBank
Branch: master
Last Commit: 31f7949
Last Changed Date: 2019-04-03 14:49:54 -0400 (Wed, 03 Apr 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  OK [ ERROR ] skipped  skipped 

Summary

Package: RMassBank
Version: 2.11.2
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RMassBank
StartedAt: 2019-04-08 20:24:55 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 20:25:33 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 38.0 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RMassBank
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* checking for file ‘RMassBank/DESCRIPTION’ ... OK
* preparing ‘RMassBank’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: Rcpp
Registered S3 methods overwritten by 'ggplot2':
  method         from 
  [.quosures     rlang
  c.quosures     rlang
  print.quosures rlang
Loaded compoundlist successfully
msmsWorkflow: Step 1. Acquire all MSMS spectra from files

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  |================================================================| 100%msmsWorkflow: Step 2. First analysis pre recalibration

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Error: processing vignette 'RMassBank.Rnw' failed with diagnostics:
 chunk 10 
Error in .jcall(mfSet, "I", "size") : 
  RcallMethod: invalid object parameter
Execution halted