Multiple platform build/check report for BioC 3.9 - INSTALL report for ProCoNA on tokay2

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/ProCoNA_1.21.1.tar.gz && rm -rf ProCoNA.buildbin-libdir && mkdir ProCoNA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ProCoNA.buildbin-libdir ProCoNA_1.21.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL ProCoNA_1.21.1.zip && rm ProCoNA_1.21.1.tar.gz ProCoNA_1.21.1.zip
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install for i386

* installing *source* package 'ProCoNA' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
==========================================================================
*
*  Package WGCNA 1.66 loaded.
*
*    Important note: It appears that your system supports multi-threading,
*    but it is not enabled within WGCNA in R. 
*    To allow multi-threading within WGCNA with all available cores, use 
*
*          allowWGCNAThreads()
*
*    within R. Use disableWGCNAThreads() to disable threading if necessary.
*    Alternatively, set the following environment variable on your system:
*
*          ALLOW_WGCNA_THREADS=<number_of_processors>
*
*    for example 
*
*          ALLOW_WGCNA_THREADS=40
*
*    To set the environment variable in linux bash shell, type 
*
*           export ALLOW_WGCNA_THREADS=40
*
*     before running R. Other operating systems or shells will
*     have a similar command to achieve the same aim.
*
==========================================================================


Note: possible error in 'pickSoftThreshold.fromSimilarity(adj(pnet), ': unused argument (networkType = networkType) 
** help
*** installing help indices
  converting help for package 'ProCoNA'
    finding HTML links ... done
    MMvsPS                                  html  
    MMvsPSallModules                        html  
    ProCoNA_Data                            html  
    accessors                               html  
    bootstrapProconaNetwork                 html  
    buildProconaNetwork                     html  
    c2i                                     html  
    compareNetworksWithFishersExactTest     html  
    compareNetworksWithFishersExactTestProcona
                                            html  
    corBootstrap                            html  
    correlationWithPhenotypesHeatMap        html  
    getFisherMatrix                         html  
    getPeptideNAs                           html  
    goStatTest                              html  
    hclust                                  html  
    i2c                                     html  
    i2col                                   html  
    moduleMemberCorrelations                html  
    modulePhenotypeCorrelations             html  
    orderMatrixIndex                        html  
    peptideConnectivityTest                 html  
    peptideCorrelationTest                  html  
    plotNet                                 html  
    ppiPermTest                             html  
    printNet                                html  
    procona-package                         html  
    proconaNet-class                        html  
    proconaVersionFun                       html  
    runningStats                            html  
    subsetModCors                           html  
    subsetPeptideData                       html  
    toPermTest                              html  
    utri                                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
==========================================================================
*
*  Package WGCNA 1.66 loaded.
*
*    Important note: It appears that your system supports multi-threading,
*    but it is not enabled within WGCNA in R. 
*    To allow multi-threading within WGCNA with all available cores, use 
*
*          allowWGCNAThreads()
*
*    within R. Use disableWGCNAThreads() to disable threading if necessary.
*    Alternatively, set the following environment variable on your system:
*
*          ALLOW_WGCNA_THREADS=<number_of_processors>
*
*    for example 
*
*          ALLOW_WGCNA_THREADS=40
*
*    To set the environment variable in linux bash shell, type 
*
*           export ALLOW_WGCNA_THREADS=40
*
*     before running R. Other operating systems or shells will
*     have a similar command to achieve the same aim.
*
==========================================================================


Warning: Package 'ProCoNA' is deprecated and will be removed from Bioconductor
  version 3.10
** testing if installed package can be loaded from final location
==========================================================================
*
*  Package WGCNA 1.66 loaded.
*
*    Important note: It appears that your system supports multi-threading,
*    but it is not enabled within WGCNA in R. 
*    To allow multi-threading within WGCNA with all available cores, use 
*
*          allowWGCNAThreads()
*
*    within R. Use disableWGCNAThreads() to disable threading if necessary.
*    Alternatively, set the following environment variable on your system:
*
*          ALLOW_WGCNA_THREADS=<number_of_processors>
*
*    for example 
*
*          ALLOW_WGCNA_THREADS=40
*
*    To set the environment variable in linux bash shell, type 
*
*           export ALLOW_WGCNA_THREADS=40
*
*     before running R. Other operating systems or shells will
*     have a similar command to achieve the same aim.
*
==========================================================================


Warning: Package 'ProCoNA' is deprecated and will be removed from Bioconductor
  version 3.10
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ProCoNA' ...
** testing if installed package can be loaded
==========================================================================
*
*  Package WGCNA 1.66 loaded.
*
*    Important note: It appears that your system supports multi-threading,
*    but it is not enabled within WGCNA in R. 
*    To allow multi-threading within WGCNA with all available cores, use 
*
*          allowWGCNAThreads()
*
*    within R. Use disableWGCNAThreads() to disable threading if necessary.
*    Alternatively, set the following environment variable on your system:
*
*          ALLOW_WGCNA_THREADS=<number_of_processors>
*
*    for example 
*
*          ALLOW_WGCNA_THREADS=40
*
*    To set the environment variable in linux bash shell, type 
*
*           export ALLOW_WGCNA_THREADS=40
*
*     before running R. Other operating systems or shells will
*     have a similar command to achieve the same aim.
*
==========================================================================


Warning: Package 'ProCoNA' is deprecated and will be removed from Bioconductor
  version 3.10
* MD5 sums
packaged installation of 'ProCoNA' as ProCoNA_1.21.1.zip
* DONE (ProCoNA)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'ProCoNA' successfully unpacked and MD5 sums checked
INSTALL report for ProCoNA on tokay2

Summary

Command output
