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INSTALL report for PoTRA on tokay2

This page was generated on 2019-04-09 12:45:11 -0400 (Tue, 09 Apr 2019).

Package 1209/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PoTRA 0.99.83
Valentin Dinu
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/PoTRA
Branch: master
Last Commit: aa5b254
Last Changed Date: 2019-04-08 16:42:41 -0400 (Mon, 08 Apr 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS YES, new version is higher than in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK YES, new version is higher than in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK YES, new version is higher than in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK 

Summary

Package: PoTRA
Version: 0.99.83
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/PoTRA_0.99.83.tar.gz && rm -rf PoTRA.buildbin-libdir && mkdir PoTRA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PoTRA.buildbin-libdir PoTRA_0.99.83.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL PoTRA_0.99.83.zip && rm PoTRA_0.99.83.tar.gz PoTRA_0.99.83.zip
StartedAt: 2019-04-08 19:26:55 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 19:27:17 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 21.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/PoTRA_0.99.83.tar.gz && rm -rf PoTRA.buildbin-libdir && mkdir PoTRA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PoTRA.buildbin-libdir PoTRA_0.99.83.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL PoTRA_0.99.83.zip && rm PoTRA_0.99.83.tar.gz PoTRA_0.99.83.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 10308  100 10308    0     0   168k      0 --:--:-- --:--:-- --:--:--  189k

install for i386

* installing *source* package 'PoTRA' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:12: unexpected UNKNOWN '\arguements'
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:25: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:26: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:27: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:28: unknown macro '\item'
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:13: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:13: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:14: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:14: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:15: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:15: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:16: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:16: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:17: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:17: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:18: All text must be in a section
Warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpiCDGnZ/R.INSTALLc343b3d6bf8/PoTRA/man/man.Rd:18: All text must be in a section
*** installing help indices
  converting help for package 'PoTRA'
    finding HTML links ... done
    man                                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'PoTRA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'PoTRA' as PoTRA_0.99.83.zip
* DONE (PoTRA)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'PoTRA' successfully unpacked and MD5 sums checked