Biocore Data Team
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/OrganismDbi |
| Branch: master |
| Last Commit: 433b62f |
| Last Changed Date: 2018-10-30 11:54:30 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 12:01:05 -0400 (Tue, 09 Apr 2019).
| Package 1129/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| OrganismDbi 1.25.0 Biocore Data Team
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
| Package: OrganismDbi |
| Version: 1.25.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/OrganismDbi_1.25.0.tar.gz && rm -rf OrganismDbi.buildbin-libdir && mkdir OrganismDbi.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OrganismDbi.buildbin-libdir OrganismDbi_1.25.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL OrganismDbi_1.25.0.zip && rm OrganismDbi_1.25.0.tar.gz OrganismDbi_1.25.0.zip |
| StartedAt: 2019-04-08 20:03:51 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 20:04:55 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 64.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/OrganismDbi_1.25.0.tar.gz && rm -rf OrganismDbi.buildbin-libdir && mkdir OrganismDbi.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OrganismDbi.buildbin-libdir OrganismDbi_1.25.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL OrganismDbi_1.25.0.zip && rm OrganismDbi_1.25.0.tar.gz OrganismDbi_1.25.0.zip
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install for i386
* installing *source* package 'OrganismDbi' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'OrganismDbi'
finding HTML links ... done
OrganismDb html
finding level-2 HTML links ... done
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmp4sXrGy/R.INSTALL209042b24075/OrganismDbi/man/OrganismDb.Rd:191: missing link 'GenomeInfoDb'
coordinate-mapping-method html
makeOrganismDbFromBiomart html
makeOrganismDbFromTxDb html
makeOrganismDbFromUCSC html
makeOrganismPackage html
rangeBasedAccessors html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'OrganismDbi' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'OrganismDbi' as OrganismDbi_1.25.0.zip
* DONE (OrganismDbi)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'OrganismDbi' successfully unpacked and MD5 sums checked