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BUILD report for Mulcom on malbec2

This page was generated on 2019-04-09 11:29:17 -0400 (Tue, 09 Apr 2019).

Package 1045/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Mulcom 1.33.0
Claudio Isella
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/Mulcom
Branch: master
Last Commit: bce25c7
Last Changed Date: 2018-10-30 11:54:29 -0400 (Tue, 30 Oct 2018)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  ERROR [ ERROR ] skipped 
tokay2 Windows Server 2012 R2 Standard / x64  ERROR  ERROR  skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  ERROR  ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: Mulcom
Version: 1.33.0
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Mulcom
StartedAt: 2019-04-08 19:29:23 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 19:29:31 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 8.3 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data Mulcom
###
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* checking for file ‘Mulcom/DESCRIPTION’ ... OK
* preparing ‘Mulcom’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘Mulcom’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG   -I/usr/local/include  -fpic  -g -O2  -Wall -c mulLibs.cc -o mulLibs.o
mulLibs.cc: In function ‘void Single_SimulationC(double*, double*, double*, double*, double*, double*, int*, int*, int*, int*, int*)’:
mulLibs.cc:708:33: warning: statement has no effect [-Wunused-value]
                 current_cluster ;
                                 ^
mulLibs.cc: In function ‘void Complete_SimulationC(double*, int*, double*, double*, int*, int*, int*, int*, int*)’:
mulLibs.cc:1022:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
                  for ( int i = 0 ; i < sss2.size() ; i++ ) {
                                    ˜˜^˜˜˜˜˜˜˜˜˜˜˜˜
mulLibs.cc:1023:46: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
                          for ( int j = 0 ; j < harmonic_means.size() ; j++ ) {
                                            ˜˜^˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜˜
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o Mulcom.so mulLibs.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
installing to /tmp/RtmpvUZQlB/Rinst6502796210f/00LOCK-Mulcom/00new/Mulcom/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error in reconcilePropertiesAndPrototype(name, slots, prototype, superClasses,  : 
  The prototype for class “MULCOM” has undefined slot(s): 'MSE_Correceted'
Error: unable to load R code in package ‘Mulcom’
Execution halted
ERROR: lazy loading failed for package ‘Mulcom’
* removing ‘/tmp/RtmpvUZQlB/Rinst6502796210f/Mulcom’
      -----------------------------------
ERROR: package installation failed