Marzia A Cremona
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/IWTomics |
| Branch: master |
| Last Commit: e9ab0f5 |
| Last Changed Date: 2018-10-30 11:54:37 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 12:28:12 -0400 (Tue, 09 Apr 2019).
| Package 834/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| IWTomics 1.7.0 Marzia A Cremona
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
| Package: IWTomics |
| Version: 1.7.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/IWTomics_1.7.0.tar.gz && rm -rf IWTomics.buildbin-libdir && mkdir IWTomics.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IWTomics.buildbin-libdir IWTomics_1.7.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL IWTomics_1.7.0.zip && rm IWTomics_1.7.0.tar.gz IWTomics_1.7.0.zip |
| StartedAt: 2019-04-08 19:37:49 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 19:39:29 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 99.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/IWTomics_1.7.0.tar.gz && rm -rf IWTomics.buildbin-libdir && mkdir IWTomics.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IWTomics.buildbin-libdir IWTomics_1.7.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL IWTomics_1.7.0.zip && rm IWTomics_1.7.0.tar.gz IWTomics_1.7.0.zip
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install for i386
* installing *source* package 'IWTomics' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'smooth' in package 'IWTomics'
** help
*** installing help indices
converting help for package 'IWTomics'
finding HTML links ... done
ETn_example html
IWTomics-internal html
IWTomics-package html
IWTomicsData-class html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/IWTomicsData-class.Rd:60: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/IWTomicsData-class.Rd:135: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/IWTomicsData-class.Rd:168: file link 'read.delim' in package 'utils' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/IWTomicsData-class.Rd:308: file link 'plot' in package 'IWTomics' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/IWTomicsData-class.Rd:309: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic
IWTomicsTest html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/IWTomicsTest.Rd:61: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/IWTomicsTest.Rd:64: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/IWTomicsTest.Rd:79: file link 'plot' in package 'IWTomics' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/IWTomicsTest.Rd:80: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic
features_example html
plot-IWTomicsData html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/plot-IWTomicsData.Rd:96: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic
plotSummary html
plotTest html
regionsFeatures_center html
regionsFeatures_scale html
regions_example html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/regions_example.Rd:19: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/regions_example.Rd:15: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
smooth-IWTomicsData html
Rd warning: C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/RtmpYXGUNk/R.INSTALL19907aa84cf4/IWTomics/man/smooth-IWTomicsData.Rd:78: file link 'plot' in package 'IWTomics' does not exist and so has been treated as a topic
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'IWTomics' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'IWTomics' as IWTomics_1.7.0.zip
* DONE (IWTomics)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'IWTomics' successfully unpacked and MD5 sums checked