Back to Multiple platform build/check report for BioC 3.9
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

INSTALL report for GENESIS on tokay2

This page was generated on 2019-04-09 12:23:22 -0400 (Tue, 09 Apr 2019).

Package 631/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GENESIS 2.13.9
Stephanie M. Gogarten
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/GENESIS
Branch: master
Last Commit: 4c25a5f
Last Changed Date: 2019-04-01 17:11:19 -0400 (Mon, 01 Apr 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: GENESIS
Version: 2.13.9
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/GENESIS_2.13.9.tar.gz && rm -rf GENESIS.buildbin-libdir && mkdir GENESIS.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GENESIS.buildbin-libdir GENESIS_2.13.9.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL GENESIS_2.13.9.zip && rm GENESIS_2.13.9.tar.gz GENESIS_2.13.9.zip
StartedAt: 2019-04-08 20:20:26 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 20:21:45 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 78.8 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/GENESIS_2.13.9.tar.gz && rm -rf GENESIS.buildbin-libdir && mkdir GENESIS.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GENESIS.buildbin-libdir GENESIS_2.13.9.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL GENESIS_2.13.9.zip && rm GENESIS_2.13.9.tar.gz GENESIS_2.13.9.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2025k  100 2025k    0     0  25.4M      0 --:--:-- --:--:-- --:--:-- 27.8M

install for i386

* installing *source* package 'GENESIS' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GENESIS'
    finding HTML links ... done
    GENESIS-package                         html  
    HapMap_ASW_MXL_KINGmat                  html  
    admixMap                                html  
    finding level-2 HTML links ... done

    assocTestAggregate                      html  
    assocTestSingle                         html  
    defunct                                 html  
    fitNullModel                            html  
    kin2gds                                 html  
    kingToMatrix                            html  
    makeSparseMatrix                        html  
    pcair                                   html  
    pcairPartition                          html  
    pcrelate                                html  
    pcrelateToMatrix                        html  
    plot.pcair                              html  
    print.pcair                             html  
    sample_annotation_1KG                   html  
    varCompCI                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GENESIS' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GENESIS' as GENESIS_2.13.9.zip
* DONE (GENESIS)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'GENESIS' successfully unpacked and MD5 sums checked