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INSTALL report for Chicago on tokay2

This page was generated on 2019-04-09 12:25:20 -0400 (Tue, 09 Apr 2019).

Package 248/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Chicago 1.11.1
Mikhail Spivakov
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/Chicago
Branch: master
Last Commit: 04e5407
Last Changed Date: 2019-01-04 13:09:08 -0400 (Fri, 04 Jan 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: Chicago
Version: 1.11.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Chicago_1.11.1.tar.gz && rm -rf Chicago.buildbin-libdir && mkdir Chicago.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Chicago.buildbin-libdir Chicago_1.11.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Chicago_1.11.1.zip && rm Chicago_1.11.1.tar.gz Chicago_1.11.1.zip
StartedAt: 2019-04-08 18:58:41 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 19:00:00 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 79.4 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Chicago_1.11.1.tar.gz && rm -rf Chicago.buildbin-libdir && mkdir Chicago.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Chicago.buildbin-libdir Chicago_1.11.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Chicago_1.11.1.zip && rm Chicago_1.11.1.tar.gz Chicago_1.11.1.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  430k  100  430k    0     0  6483k      0 --:--:-- --:--:-- --:--:-- 7170k

install for i386

* installing *source* package 'Chicago' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Chicago'
    finding HTML links ... done
    Chicago-package                         html  
    cdUnitTest                              html  
    chicagoData                             html  
    chicagoPipeline                         html  
    copyCD                                  html  
    defaultSettings                         html  
    estimateBrownianComponent               html  
    estimateDistFun                         html  
    estimateTechnicalNoise                  html  
    exportResults                           html  
    getPvals                                html  
    getScores                               html  
    getSkOnly                               html  
    mergeSamples                            html  
    modifySettings                          html  
    normaliseBaits                          html  
    normaliseOtherEnds                      html  
    overlapFragWithFeatures                 html  
    finding level-2 HTML links ... done

    peakEnrichment4Features                 html  
    plotBaits                               html  
    plotDistFun                             html  
    readAndMerge                            html  
    readSample                              html  
    setExperiment                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Chicago' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Chicago' as Chicago_1.11.1.zip
* DONE (Chicago)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'Chicago' successfully unpacked and MD5 sums checked