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INSTALL report for sva on malbec1

This page was generated on 2019-04-16 11:49:25 -0400 (Tue, 16 Apr 2019).

Package 1529/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
sva 3.30.1
Jeffrey T. Leek , John D. Storey
Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019)
URL: https://git.bioconductor.org/packages/sva
Branch: RELEASE_3_8
Last Commit: fdb98bc
Last Changed Date: 2019-01-04 13:12:32 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: sva
Version: 3.30.1
Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL sva
StartedAt: 2019-04-15 18:05:02 -0400 (Mon, 15 Apr 2019)
EndedAt: 2019-04-15 18:05:14 -0400 (Mon, 15 Apr 2019)
EllapsedTime: 12.1 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL sva
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* installing to library ‘/home/biocbuild/bbs-3.8-bioc/R/library’
* installing *source* package ‘sva’ ...
** libs
gcc -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c sva.c -o sva.o
sva.c:27:34: warning: missing braces around initializer [-Wmissing-braces]
 R_CallMethodDef callMethods[]  = {
                                  ^
sva.c:27:34: note: (near initialization for ‘callMethods’)
gcc -shared -L/home/biocbuild/bbs-3.8-bioc/R/lib -L/usr/local/lib -o sva.so sva.o -L/home/biocbuild/bbs-3.8-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.8-bioc/R/library/sva/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (sva)