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INSTALL report for pepStat on tokay1

This page was generated on 2019-04-13 11:24:02 -0400 (Sat, 13 Apr 2019).

Package 1142/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pepStat 1.16.0
Gregory C Imholte
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/pepStat
Branch: RELEASE_3_8
Last Commit: 3e2b046
Last Changed Date: 2018-10-30 11:41:54 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: pepStat
Version: 1.16.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/pepStat_1.16.0.tar.gz && rm -rf pepStat.buildbin-libdir && mkdir pepStat.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pepStat.buildbin-libdir pepStat_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL pepStat_1.16.0.zip && rm pepStat_1.16.0.tar.gz pepStat_1.16.0.zip
StartedAt: 2019-04-12 19:48:58 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:49:33 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 35.2 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/pepStat_1.16.0.tar.gz && rm -rf pepStat.buildbin-libdir && mkdir pepStat.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pepStat.buildbin-libdir pepStat_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL pepStat_1.16.0.zip && rm pepStat_1.16.0.tar.gz pepStat_1.16.0.zip
###
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install for i386

* installing *source* package 'pepStat' ...
** R
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'GenomicRanges' for request: 'mcols<-' when loading 'pepStat'
No methods found in package 'GenomicRanges' for request: 'mcols' when loading 'pepStat'
** help
*** installing help indices
  converting help for package 'pepStat'
    finding HTML links ... done
    baselineCorrect.pSet                    html  
    baseline_correct                        html  
    create_db                               html  
    finding level-2 HTML links ... done

    makeCalls                               html  
    makePeptideSet                          html  
    normalizeArray                          html  
    peptideSet-methods                      html  
    peptideSet                              html  
    plotArray                               html  
    restab                                  html  
    shinyPepStat                            html  
    slidingMean                             html  
    summarizePeptides                       html  
** building package indices
** installing vignettes
   'pepStat.Rnw' 
** testing if installed package can be loaded
No methods found in package 'GenomicRanges' for request: 'mcols<-' when loading 'pepStat'
No methods found in package 'GenomicRanges' for request: 'mcols' when loading 'pepStat'
In R CMD INSTALL

install for x64

* installing *source* package 'pepStat' ...
** testing if installed package can be loaded
No methods found in package 'GenomicRanges' for request: 'mcols<-' when loading 'pepStat'
No methods found in package 'GenomicRanges' for request: 'mcols' when loading 'pepStat'
* MD5 sums
packaged installation of 'pepStat' as pepStat_1.16.0.zip
* DONE (pepStat)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'pepStat' successfully unpacked and MD5 sums checked
In R CMD INSTALL