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INSTALL report for iPAC on tokay1

This page was generated on 2019-04-13 11:22:16 -0400 (Sat, 13 Apr 2019).

Package 789/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
iPAC 1.26.0
Gregory Ryslik
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/iPAC
Branch: RELEASE_3_8
Last Commit: bebe766
Last Changed Date: 2018-10-30 11:41:49 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  ERROR  OK 
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: iPAC
Version: 1.26.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/iPAC_1.26.0.tar.gz && rm -rf iPAC.buildbin-libdir && mkdir iPAC.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iPAC.buildbin-libdir iPAC_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL iPAC_1.26.0.zip && rm iPAC_1.26.0.tar.gz iPAC_1.26.0.zip
StartedAt: 2019-04-12 19:11:58 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:12:30 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 31.5 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/iPAC_1.26.0.tar.gz && rm -rf iPAC.buildbin-libdir && mkdir iPAC.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=iPAC.buildbin-libdir iPAC_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL iPAC_1.26.0.zip && rm iPAC_1.26.0.tar.gz iPAC_1.26.0.zip
###
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100  163k  100  163k    0     0  4743k      0 --:--:-- --:--:-- --:--:-- 5271k

install for i386

* installing *source* package 'iPAC' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'iPAC'
    finding HTML links ... done
    ClusterFind                             html  
    KRAS.Mutations                          html  
    PIK3CA.Mutations                        html  
    Plot.Protein.Linear                     html  
    get.AASeq                               html  
    get.AlignedPositions                    html  
    get.Positions                           html  
    get.Remapped.Order                      html  
    get.SingleLetterCode                    html  
    iPAC-package                            html  
    nmc                                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'iPAC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'iPAC' as iPAC_1.26.0.zip
* DONE (iPAC)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'iPAC' successfully unpacked and MD5 sums checked
In R CMD INSTALL