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INSTALL report for SamSPECTRAL on malbec1

This page was generated on 2019-04-16 11:48:52 -0400 (Tue, 16 Apr 2019).

Package 1382/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SamSPECTRAL 1.36.1
Habil
Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019)
URL: https://git.bioconductor.org/packages/SamSPECTRAL
Branch: RELEASE_3_8
Last Commit: 65d4c9d
Last Changed Date: 2019-01-04 13:07:06 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64 [ OK ] OK  WARNINGS UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: SamSPECTRAL
Version: 1.36.1
Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL SamSPECTRAL
StartedAt: 2019-04-15 17:57:45 -0400 (Mon, 15 Apr 2019)
EndedAt: 2019-04-15 17:57:48 -0400 (Mon, 15 Apr 2019)
EllapsedTime: 3.3 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL SamSPECTRAL
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* installing to library ‘/home/biocbuild/bbs-3.8-bioc/R/library’
* installing *source* package ‘SamSPECTRAL’ ...
** libs
gcc -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c Rinit.c -o Rinit.o
gcc -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c conductance_computation.c -o conductance_computation.o
conductance_computation.c: In function ‘conductance_computation’:
conductance_computation.c:155:17: warning: variable ‘repres_ind’ set but not used [-Wunused-but-set-variable]
  int *density, *repres_ind;
                 ^
conductance_computation.c:155:7: warning: variable ‘density’ set but not used [-Wunused-but-set-variable]
  int *density, *repres_ind;
       ^
gcc -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c maximum_of_rows.c -o maximum_of_rows.o
gcc -shared -L/home/biocbuild/bbs-3.8-bioc/R/lib -L/usr/local/lib -o SamSPECTRAL.so Rinit.o conductance_computation.o maximum_of_rows.o -L/home/biocbuild/bbs-3.8-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.8-bioc/R/library/SamSPECTRAL/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (SamSPECTRAL)