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BUILD report for synapter on merida1

This page was generated on 2019-04-16 11:56:23 -0400 (Tue, 16 Apr 2019).

Package 1538/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
synapter 2.6.1
Laurent Gatto
Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019)
URL: https://git.bioconductor.org/packages/synapter
Branch: RELEASE_3_8
Last Commit: 0dcf262
Last Changed Date: 2019-01-04 13:12:41 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK [ ERROR ] skipped  skipped 

Summary

Package: synapter
Version: 2.6.1
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data synapter
StartedAt: 2019-04-15 19:37:55 -0400 (Mon, 15 Apr 2019)
EndedAt: 2019-04-15 19:38:43 -0400 (Mon, 15 Apr 2019)
EllapsedTime: 47.6 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data synapter
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* checking for file ‘synapter/DESCRIPTION’ ... OK
* preparing ‘synapter’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
sh: line 1: 90384 Abort trap: 6           'convert' '/private/tmp/RtmpUPoZjY/synapter_report_20190415-193838_files/figure-html/synergise.filtering.pepScores-1.png' -trim '/private/tmp/RtmpUPoZjY/synapter_report_20190415-193838_files/figure-html/synergise.filtering.pepScores-1.png' > /dev/null
sh: line 1: 90497 Abort trap: 6           'convert' '/private/tmp/RtmpUPoZjY/synapter_report_20190415-193838_files/figure-html/synergise.filtering.fdr-1.png' -trim '/private/tmp/RtmpUPoZjY/synapter_report_20190415-193838_files/figure-html/synergise.filtering.fdr-1.png' > /dev/null
Quitting from lines 81-82 (synergise1.Rmd) 
Error: processing vignette 'fragmentmatching.Rmd' failed with diagnostics:
attempt to set an attribute on NULL
Execution halted