Matthias Zytnicki
| Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019) |
| URL: https://git.bioconductor.org/packages/srnadiff |
| Branch: RELEASE_3_8 |
| Last Commit: 1c2d7d9 |
| Last Changed Date: 2019-01-04 13:51:31 -0400 (Fri, 04 Jan 2019) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-16 12:05:16 -0400 (Tue, 16 Apr 2019).
| Package 1504/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| srnadiff 1.2.1 Matthias Zytnicki
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | [ OK ] | |
| Package: srnadiff |
| Version: 1.2.1 |
| Command: rm -rf srnadiff.buildbin-libdir && mkdir srnadiff.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh srnadiff_1.2.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R srnadiff.buildbin-libdir |
| StartedAt: 2019-04-16 04:48:00 -0400 (Tue, 16 Apr 2019) |
| EndedAt: 2019-04-16 04:49:34 -0400 (Tue, 16 Apr 2019) |
| EllapsedTime: 93.5 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: srnadiff_1.2.1.tgz |
| PackageFileSize: 2.18 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf srnadiff.buildbin-libdir && mkdir srnadiff.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh srnadiff_1.2.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R srnadiff.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=srnadiff.buildbin-libdir srnadiff_1.2.1.tar.gz' >>>>>>> * installing *source* package ‘srnadiff’ ... ** libs clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c rcpp_hmm.cpp -o rcpp_hmm.o clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c rcpp_naive.cpp -o rcpp_naive.o clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c rcpp_slice.cpp -o rcpp_slice.o clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c rcpp_utils.cpp -o rcpp_utils.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I/usr/local/include -fPIC -Wall -g -O2 -c srnadiff_init.c -o srnadiff_init.o clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o srnadiff.so RcppExports.o rcpp_hmm.o rcpp_naive.o rcpp_slice.o rcpp_utils.o srnadiff_init.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.8-bioc/meat/srnadiff.buildbin-libdir/srnadiff/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (srnadiff) >>>>>>> >>>>>>> FIXING LINKS FOR srnadiff.buildbin-libdir/srnadiff/libs//srnadiff.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgcc_s.1.dylib" "srnadiff.buildbin-libdir/srnadiff/libs//srnadiff.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgfortran.3.dylib" "srnadiff.buildbin-libdir/srnadiff/libs//srnadiff.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.5.2.dylib" "srnadiff.buildbin-libdir/srnadiff/libs//srnadiff.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.dylib" "srnadiff.buildbin-libdir/srnadiff/libs//srnadiff.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libquadmath.0.dylib" "srnadiff.buildbin-libdir/srnadiff/libs//srnadiff.so"