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INSTALL report for rhdf5client on malbec1

This page was generated on 2019-04-16 11:53:07 -0400 (Tue, 16 Apr 2019).

Package 1306/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rhdf5client 1.4.1
Samuela Pollack
Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019)
URL: https://git.bioconductor.org/packages/rhdf5client
Branch: RELEASE_3_8
Last Commit: 939791a
Last Changed Date: 2018-12-14 12:44:21 -0400 (Fri, 14 Dec 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64 [ OK ] OK  WARNINGS UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: rhdf5client
Version: 1.4.1
Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL rhdf5client
StartedAt: 2019-04-15 18:07:34 -0400 (Mon, 15 Apr 2019)
EndedAt: 2019-04-15 18:07:43 -0400 (Mon, 15 Apr 2019)
EllapsedTime: 9.4 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL rhdf5client
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* installing to library ‘/home/biocbuild/bbs-3.8-bioc/R/library’
* installing *source* package ‘rhdf5client’ ...
** libs
gcc -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c extract.c -o extract.o
extract.c: In function ‘extractBin’:
extract.c:101:42: warning: ‘rdp’ may be used uninitialized in this function [-Wmaybe-uninitialized]
     A[ia] = (Rf_isReal(resvec_sexp) ? rdp[ib] : rip[ib]);
                                          ^
extract.c:101:52: warning: ‘rip’ may be used uninitialized in this function [-Wmaybe-uninitialized]
     A[ia] = (Rf_isReal(resvec_sexp) ? rdp[ib] : rip[ib]);
                                                    ^
gcc -shared -L/home/biocbuild/bbs-3.8-bioc/R/lib -L/usr/local/lib -o rhdf5client.so extract.o -L/home/biocbuild/bbs-3.8-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.8-bioc/R/library/rhdf5client/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (rhdf5client)