Back to Multiple platform build/check report for BioC 3.8
ABCDEF[G]HIJKLMNOPQRSTUVWXYZ

BUILD BIN report for gaggle on merida1

This page was generated on 2019-04-16 11:54:28 -0400 (Tue, 16 Apr 2019).

Package 569/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gaggle 1.50.0
Christopher Bare
Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019)
URL: https://git.bioconductor.org/packages/gaggle
Branch: RELEASE_3_8
Last Commit: af6a1fe
Last Changed Date: 2018-10-30 11:41:43 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: gaggle
Version: 1.50.0
Command: rm -rf gaggle.buildbin-libdir && mkdir gaggle.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh gaggle_1.50.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R gaggle.buildbin-libdir
StartedAt: 2019-04-16 04:05:09 -0400 (Tue, 16 Apr 2019)
EndedAt: 2019-04-16 04:05:54 -0400 (Tue, 16 Apr 2019)
EllapsedTime: 44.9 seconds
RetCode: 0
Status:  OK 
PackageFile: gaggle_1.50.0.tgz
PackageFileSize: 322.5 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf gaggle.buildbin-libdir && mkdir gaggle.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh gaggle_1.50.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R gaggle.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=gaggle.buildbin-libdir gaggle_1.50.0.tar.gz'
>>>>>>> 

* installing *source* package ‘gaggle’ ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

onLoad -- libname: /Users/biocbuild/bbs-3.8-bioc/meat/gaggle.buildbin-libdir pkgname: gaggle 
path to jar: /Users/biocbuild/bbs-3.8-bioc/meat/gaggle.buildbin-libdir/gaggle/jars/gaggleRShell.jar 
      script:  gaggle.R $Revision: 4499 $   $Date: 2010-08-10 17:15:03 -0700 (Tue, 10 Aug 2010) $ 
  os version:  Mac OS X 
 jvm version:  1.8.0_111 

   You are using the wrong version of Java.
   Please see http://gaggle.systemsbiology.org/docs/html/java

* DONE (gaggle)