Sebastian Gibb
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/topdownr |
| Branch: RELEASE_3_6 |
| Last Commit: 7b5e50e |
| Last Changed Date: 2017-10-30 12:42:04 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:30:44 -0400 (Thu, 12 Apr 2018).
| Package 1408/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| topdownr 1.0.0 Sebastian Gibb
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: topdownr |
| Version: 1.0.0 |
| Command: rm -rf topdownr.buildbin-libdir && mkdir topdownr.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/topdownr_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=topdownr.buildbin-libdir --merge-multiarch topdownr_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL topdownr_1.0.0.zip && rm topdownr_1.0.0.tar.gz topdownr_1.0.0.zip |
| StartedAt: 2018-04-11 18:56:53 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:58:07 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 74.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf topdownr.buildbin-libdir && mkdir topdownr.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/topdownr_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=topdownr.buildbin-libdir --merge-multiarch topdownr_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL topdownr_1.0.0.zip && rm topdownr_1.0.0.tar.gz topdownr_1.0.0.zip
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install for i386
* installing *source* package 'topdownr' ...
** R
** data
*** moving datasets to lazyload DB
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'topdownr'
finding HTML links ... done
AbstractTopDownSet-class html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpkxCrsB/R.INSTALL10c43eabd07/topdownr/man/AbstractTopDownSet-class.Rd:181: missing file link 'XStringViews'
FragmentViews-class html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpkxCrsB/R.INSTALL10c43eabd07/topdownr/man/FragmentViews-class.Rd:66: missing file link 'AAString'
NCBSet-class html
TopDownSet-class html
default-functions html
readTopDownFiles html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpkxCrsB/R.INSTALL10c43eabd07/topdownr/man/readTopDownFiles.Rd:25: missing file link 'calculateFragments'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpkxCrsB/R.INSTALL10c43eabd07/topdownr/man/readTopDownFiles.Rd:46: missing file link 'calculateFragments'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpkxCrsB/R.INSTALL10c43eabd07/topdownr/man/readTopDownFiles.Rd:47: missing file link 'defaultNeutralLoss'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpkxCrsB/R.INSTALL10c43eabd07/topdownr/man/readTopDownFiles.Rd:97: missing file link 'calculateFragments'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpkxCrsB/R.INSTALL10c43eabd07/topdownr/man/readTopDownFiles.Rd:123: missing file link 'calculateFragments'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpkxCrsB/R.INSTALL10c43eabd07/topdownr/man/readTopDownFiles.Rd:124: missing file link 'defaultNeutralLoss'
tds html
topdownr-package html
windows-specific-functions html
writeMethodXmls html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'topdownr' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'topdownr' as topdownr_1.0.0.zip
* DONE (topdownr)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'topdownr' successfully unpacked and MD5 sums checked
In R CMD INSTALL