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INSTALL report for roar on tokay1

This page was generated on 2018-04-12 13:23:40 -0400 (Thu, 12 Apr 2018).

Package 1200/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
roar 1.14.0
Elena Grassi
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/roar
Branch: RELEASE_3_6
Last Commit: 71d9e64
Last Changed Date: 2017-10-30 12:40:10 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: roar
Version: 1.14.0
Command: rm -rf roar.buildbin-libdir && mkdir roar.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/roar_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=roar.buildbin-libdir --merge-multiarch roar_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL roar_1.14.0.zip && rm roar_1.14.0.tar.gz roar_1.14.0.zip
StartedAt: 2018-04-11 18:47:24 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:48:29 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 64.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf roar.buildbin-libdir && mkdir roar.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/roar_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=roar.buildbin-libdir --merge-multiarch roar_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL roar_1.14.0.zip  && rm roar_1.14.0.tar.gz roar_1.14.0.zip
###
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install for i386

* installing *source* package 'roar' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'roar'
    finding HTML links ... done
    RoarDataset-class                       html  
    finding level-2 HTML links ... done

    RoarDataset-constructor                 html  
    RoarDatasetFromFiles-constructor        html  
    RoarDatasetMultipleAPA-class            html  
    RoarDatasetMultipleAPA-constructor      html  
    RoarDatasetMultipleAPAFromFiles-constructor
                                            html  
    checkStep-method                        html  
    combineFisherMethod-method              html  
    computePairedPvals-method               html  
    computePvals-method                     html  
    computeRoars-method                     html  
    cores-method                            html  
    countPrePost-method                     html  
    countResults-method                     html  
    fpkmResults-method                      html  
    getFisher-method                        html  
    meanAcrossAssays-method                 html  
    pvalueCorrectFilter-method              html  
    pvalueFilter-method                     html  
    roar-package                            html  
    standardFilter-method                   html  
    totalResults-method                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'roar' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'roar' as roar_1.14.0.zip
* DONE (roar)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'roar' successfully unpacked and MD5 sums checked
In R CMD INSTALL