Frank Kramer
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/rBiopaxParser |
| Branch: RELEASE_3_6 |
| Last Commit: 304eb01 |
| Last Changed Date: 2017-10-30 12:39:59 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:22:30 -0400 (Thu, 12 Apr 2018).
| Package 1125/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| rBiopaxParser 2.18.0 Frank Kramer
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: rBiopaxParser |
| Version: 2.18.0 |
| Command: cd rBiopaxParser.buildbin-libdir/rBiopaxParser && zip -r ../../rBiopaxParser_2.18.0.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:59:06 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:59:36 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 30.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: rBiopaxParser_2.18.0.zip |
| PackageFileSize: 1.546 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd rBiopaxParser.buildbin-libdir/rBiopaxParser && zip -r ../../rBiopaxParser_2.18.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 45%) adding: data/ (372 bytes security) (stored 0%) adding: data/biopaxexample.rda (332 bytes security) (stored 0%) adding: data/biopaxLevel3Example.RData (332 bytes security) (deflated 4%) adding: DESCRIPTION (332 bytes security) (deflated 37%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/index.html (332 bytes security) (deflated 61%) adding: doc/rBiopaxParserVignette.pdf (332 bytes security) (deflated 16%) adding: doc/rBiopaxParserVignette.R (332 bytes security) (deflated 82%) adding: doc/rBiopaxParserVignette.Rnw (332 bytes security) (deflated 69%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 71%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: help/rBiopaxParser.rdb (332 bytes security) (deflated 2%) adding: help/rBiopaxParser.rdx (332 bytes security) (deflated 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 79%) adding: html/addBiochemicalReaction.html (332 bytes security) (deflated 61%) adding: html/addBiopaxInstance.html (332 bytes security) (deflated 57%) adding: html/addBiopaxInstances.html (332 bytes security) (deflated 54%) adding: html/addControl.html (332 bytes security) (deflated 62%) adding: html/addhash.html (332 bytes security) (deflated 47%) adding: html/addns.html (332 bytes security) (deflated 52%) adding: html/addPathway.html (332 bytes security) (deflated 62%) adding: html/addPathwayComponents.html (332 bytes security) (deflated 62%) adding: html/addPhysicalEntity.html (332 bytes security) (deflated 60%) adding: html/addPhysicalEntityParticipant.html (332 bytes security) (deflated 60%) adding: html/addPropertiesToBiopaxInstance.html (332 bytes security) (deflated 57%) adding: html/biopax.html (332 bytes security) (deflated 50%) adding: html/calcGraphOverlap.html (332 bytes security) (deflated 53%) adding: html/checkValidity.html (332 bytes security) (deflated 49%) adding: html/CLASS_INHERITANCE_BP2.html (332 bytes security) (deflated 48%) adding: html/CLASS_INHERITANCE_BP3.html (332 bytes security) (deflated 47%) adding: html/CLASS_PROPERTIES_BP2.html (332 bytes security) (deflated 50%) adding: html/CLASS_PROPERTIES_BP3.html (332 bytes security) (deflated 50%) adding: html/colorGraphNodes.html (332 bytes security) (deflated 55%) adding: html/combineNodes.html (332 bytes security) (deflated 53%) adding: html/createBiopax.html (332 bytes security) (deflated 52%) adding: html/DATABASE_BIOPAX.html (332 bytes security) (deflated 49%) adding: html/diffGraphs.html (332 bytes security) (deflated 56%) adding: html/downloadBiopaxData.html (332 bytes security) (deflated 57%) adding: html/generateNewUniqueID.html (332 bytes security) (deflated 51%) adding: html/getClassProperties.html (332 bytes security) (deflated 54%) adding: html/getInstanceClass.html (332 bytes security) (deflated 54%) adding: html/getInstanceProperty.html (332 bytes security) (deflated 59%) adding: html/getNeighborhood.html (332 bytes security) (deflated 56%) adding: html/getParticipants.html (332 bytes security) (deflated 56%) adding: html/getReferencedIDs.html (332 bytes security) (deflated 57%) adding: html/getReferencingIDs.html (332 bytes security) (deflated 57%) adding: html/getSubClasses.html (332 bytes security) (deflated 54%) adding: html/getSuperClasses.html (332 bytes security) (deflated 54%) adding: html/getXrefAnnotations.html (332 bytes security) (deflated 60%) adding: html/hasProperty.html (332 bytes security) (deflated 52%) adding: html/internal_checkArguments.html (332 bytes security) (deflated 59%) adding: html/internal_generateXMLfromBiopax.html (332 bytes security) (deflated 53%) adding: html/internal_getBiopaxModelAsDataFrame.html (332 bytes security) (deflated 57%) adding: html/internal_NrOfXMLNodes.html (332 bytes security) (deflated 53%) adding: html/internal_propertyListToDF.html (332 bytes security) (deflated 58%) adding: html/internal_resolvePhysicalEntityParticipant.html (332 bytes security) (deflated 58%) adding: html/internal_XMLInstance2DF.html (332 bytes security) (deflated 56%) adding: html/intersectGraphs.html (332 bytes security) (deflated 55%) adding: html/isOfClass.html (332 bytes security) (deflated 55%) adding: html/isOfNamespace.html (332 bytes security) (deflated 52%) adding: html/isURL.html (332 bytes security) (deflated 49%) adding: html/layoutRegulatoryGraph.html (332 bytes security) (deflated 58%) adding: html/listComplexComponents.html (332 bytes security) (deflated 54%) adding: html/listInstances.html (332 bytes security) (deflated 63%) adding: html/listInteractionComponents.html (332 bytes security) (deflated 57%) adding: html/listPathwayComponents.html (332 bytes security) (deflated 56%) adding: html/listPathways.html (332 bytes security) (deflated 52%) adding: html/mergePathways.html (332 bytes security) (deflated 60%) adding: html/pathway2AdjacancyMatrix.html (332 bytes security) (deflated 61%) adding: html/pathway2Geneset.html (332 bytes security) (deflated 59%) adding: html/pathway2Graph.html (332 bytes security) (deflated 64%) adding: html/pathway2RegulatoryGraph.html (332 bytes security) (deflated 64%) adding: html/plotRegulatoryGraph.html (332 bytes security) (deflated 55%) adding: html/print.biopax.html (332 bytes security) (deflated 50%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/rBiopaxParser-package.html (332 bytes security) (deflated 61%) adding: html/readBiopax.html (332 bytes security) (deflated 53%) adding: html/removeDisconnectedParts.html (332 bytes security) (deflated 52%) adding: html/removeInstance.html (332 bytes security) (deflated 51%) adding: html/removeNodes.html (332 bytes security) (deflated 53%) adding: html/removeProperties.html (332 bytes security) (deflated 53%) adding: html/selectInstances.html (332 bytes security) (deflated 68%) adding: html/splitComplex.html (332 bytes security) (deflated 57%) adding: html/striphash.html (332 bytes security) (deflated 48%) adding: html/stripns.html (332 bytes security) (deflated 51%) adding: html/transitiveClosure.html (332 bytes security) (deflated 50%) adding: html/transitiveReduction.html (332 bytes security) (deflated 51%) adding: html/unfactorize.html (332 bytes security) (deflated 50%) adding: html/uniteGraphs.html (332 bytes security) (deflated 55%) adding: html/writeBiopax.html (332 bytes security) (deflated 57%) adding: INDEX (332 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unitTests/test_biopax2Classes.R (332 bytes security) (deflated 73%) adding: unitTests/test_downloadBiopaxData.R (332 bytes security) (deflated 53%) adding: unitTests/test_helperFunctions.R (332 bytes security) (deflated 67%)