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INSTALL report for mfa on tokay1

This page was generated on 2018-04-12 13:30:02 -0400 (Thu, 12 Apr 2018).

Package 846/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mfa 1.0.0
Kieran Campbell
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/mfa
Branch: RELEASE_3_6
Last Commit: 2994eb7
Last Changed Date: 2017-10-30 12:41:31 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: mfa
Version: 1.0.0
Command: rm -rf mfa.buildbin-libdir && mkdir mfa.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/mfa_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=mfa.buildbin-libdir --merge-multiarch mfa_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL mfa_1.0.0.zip && rm mfa_1.0.0.tar.gz mfa_1.0.0.zip
StartedAt: 2018-04-11 18:23:16 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:25:08 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 111.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf mfa.buildbin-libdir && mkdir mfa.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/mfa_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=mfa.buildbin-libdir --merge-multiarch mfa_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL mfa_1.0.0.zip  && rm mfa_1.0.0.tar.gz mfa_1.0.0.zip
###
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install for i386

* installing *source* package 'mfa' ...
** libs
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include"   -I"C:/local323/include"     -O2 -Wall  -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include"   -I"C:/local323/include"     -O2 -Wall  -mtune=generic -c gibbs.cpp -o gibbs.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o mfa.dll tmp.def RcppExports.o gibbs.o -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/mfa.buildbin-libdir/mfa/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'mfa'
    finding HTML links ... done
    calculate_chi                           html  
    create_synthetic                        html  
    cs_sigmoid                              html  
    empirical_lambda                        html  
    log_sum_exp                             html  
    map_branch                              html  
    mcmcify                                 html  
    mfa                                     html  
    plot_chi                                html  
    plot_dropout_relationship               html  
    plot_mfa_autocorr                       html  
    plot_mfa_trace                          html  
    posterior                               html  
    print.mfa                               html  
    summary.mfa                             html  
    to_ggmcmc                               html  
    transient                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'mfa' ...
** libs
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include"   -I"C:/local323/include"     -O2 -Wall  -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include"   -I"C:/local323/include"     -O2 -Wall  -mtune=generic -c gibbs.cpp -o gibbs.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o mfa.dll tmp.def RcppExports.o gibbs.o -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/mfa.buildbin-libdir/mfa/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'mfa' as mfa_1.0.0.zip
* DONE (mfa)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'mfa' successfully unpacked and MD5 sums checked
In R CMD INSTALL