Kylie A. Bemis
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/matter |
| Branch: RELEASE_3_6 |
| Last Commit: ec72f93 |
| Last Changed Date: 2017-11-02 17:56:24 -0400 (Thu, 02 Nov 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:15:33 -0400 (Thu, 12 Apr 2018).
| Package 793/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| matter 1.4.1 Kylie A. Bemis
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | [ OK ] | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: matter |
| Version: 1.4.1 |
| Command: /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD INSTALL matter |
| StartedAt: 2018-04-11 17:59:15 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 17:59:36 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 20.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD INSTALL matter
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* installing to library ‘/home/biocbuild/bbs-3.6-bioc/R/library’
* installing *source* package ‘matter’ ...
** libs
g++ -I/home/biocbuild/bbs-3.6-bioc/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c init.cpp -o init.o
g++ -I/home/biocbuild/bbs-3.6-bioc/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c matter.cpp -o matter.o
matter.cpp: In member function ‘void Ops::do_ops(T*, Atoms*, index_t, index_t, size_t) [with T = double; index_t = long int; size_t = long unsigned int]’:
matter.cpp:2903:25: warning: ‘y’ may be used uninitialized in this function [-Wmaybe-uninitialized]
add<T,T>(x, y, i, atm, 0, count, skip);
^
matter.cpp: In member function ‘void Ops::do_ops(T*, Atoms*, index_t, index_t, size_t) [with T = int; index_t = long int; size_t = long unsigned int]’:
matter.cpp:2903:25: warning: ‘y’ may be used uninitialized in this function [-Wmaybe-uninitialized]
matter.cpp: In member function ‘void Ops::do_ops(T*, Atoms*, index_t, index_t, size_t) [with T = unsigned char; index_t = long int; size_t = long unsigned int]’:
matter.cpp:2903:25: warning: ‘y’ may be used uninitialized in this function [-Wmaybe-uninitialized]
matter.cpp: In function ‘double var(MatterIterator<T>&, bool) [with T = double]’:
matter.cpp:3538:17: warning: ‘s_new’ may be used uninitialized in this function [-Wmaybe-uninitialized]
s_new = s_old + (*x - m_old) * (*x - m_new);
^
matter.cpp:3537:17: warning: ‘m_new’ may be used uninitialized in this function [-Wmaybe-uninitialized]
m_new = m_old + (*x - m_old) / n;
^
g++ -I/home/biocbuild/bbs-3.6-bioc/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c utils.cpp -o utils.o
g++ -shared -L/home/biocbuild/bbs-3.6-bioc/R/lib -L/usr/local/lib -o matter.so init.o matter.o utils.o -L/home/biocbuild/bbs-3.6-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.6-bioc/R/library/matter/libs
** R
** data
** preparing package for lazy loading
Creating a new generic function for ‘apply’ in package ‘matter’
Creating a new generic function for ‘scale’ in package ‘matter’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (matter)