Anand Mayakonda
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/maftools |
| Branch: RELEASE_3_6 |
| Last Commit: 3816106 |
| Last Changed Date: 2018-04-10 05:41:34 -0400 (Tue, 10 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:28:26 -0400 (Thu, 12 Apr 2018).
| Package 774/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| maftools 1.4.28 Anand Mayakonda
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: maftools |
| Version: 1.4.28 |
| Command: cd maftools.buildbin-libdir/maftools && zip -r ../../maftools_1.4.28.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:48:53 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:49:31 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 37.9 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: maftools_1.4.28.zip |
| PackageFileSize: 12.16 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd maftools.buildbin-libdir/maftools && zip -r ../../maftools_1.4.28.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 51%) adding: DESCRIPTION (332 bytes security) (deflated 43%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/index.html (332 bytes security) (deflated 57%) adding: doc/maftools.html (332 bytes security) (deflated 43%) adding: doc/maftools.R (332 bytes security) (deflated 70%) adding: doc/maftools.Rmd (332 bytes security) (deflated 66%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/all_lesions.conf_99.txt (332 bytes security) (deflated 78%) adding: extdata/amp_genes.conf_99.txt (332 bytes security) (deflated 46%) adding: extdata/APL_primary.maf.gz (332 bytes security) (stored 0%) adding: extdata/APL_relapse.maf.gz (332 bytes security) (stored 0%) adding: extdata/coad.maf.gz (332 bytes security) (deflated 0%) adding: extdata/del_genes.conf_99.txt (332 bytes security) (deflated 64%) adding: extdata/ensGenes.txt.gz (332 bytes security) (deflated 0%) adding: extdata/hugo_to_mutSigSymbol.txt.gz (332 bytes security) (stored 0%) adding: extdata/LAML_sig_genes.txt.gz (332 bytes security) (deflated 0%) adding: extdata/pancan.txt.gz (332 bytes security) (stored 0%) adding: extdata/protein_domains.txt.gz (332 bytes security) (deflated 0%) adding: extdata/prot_len.txt.gz (332 bytes security) (deflated 0%) adding: extdata/scores.gistic (332 bytes security) (deflated 79%) adding: extdata/signatures.txt (332 bytes security) (deflated 63%) adding: extdata/simple_somatic_mutation.open.ESCA-CN.sample.tsv.gz (332 bytes security) (stored 0%) adding: extdata/TCGA.AB.3009.hg19.seg.txt (332 bytes security) (deflated 66%) adding: extdata/tcga_cohort.txt.gz (332 bytes security) (deflated 0%) adding: extdata/tcga_laml.maf.gz (332 bytes security) (deflated 0%) adding: extdata/tcga_laml_annot.tsv (332 bytes security) (deflated 74%) adding: extdata/variants.hg19_multianno.txt (332 bytes security) (deflated 88%) adding: extdata/variants.tsv (332 bytes security) (deflated 62%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 68%) adding: help/maftools.rdb (332 bytes security) (deflated 2%) adding: help/maftools.rdx (332 bytes security) (stored 0%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 75%) adding: html/annovarToMaf.html (332 bytes security) (deflated 59%) adding: html/coOncoplot.html (332 bytes security) (deflated 69%) adding: html/extractSignatures.html (332 bytes security) (deflated 58%) adding: html/forestPlot.html (332 bytes security) (deflated 62%) adding: html/geneCloud.html (332 bytes security) (deflated 57%) adding: html/genesToBarcodes.html (332 bytes security) (deflated 54%) adding: html/genotypeMatrix.html (332 bytes security) (deflated 57%) adding: html/getClinicalData.html (332 bytes security) (deflated 49%) adding: html/getCytobandSummary.html (332 bytes security) (deflated 56%) adding: html/getFields.html (332 bytes security) (deflated 48%) adding: html/getGeneSummary.html (332 bytes security) (deflated 51%) adding: html/getSampleSummary.html (332 bytes security) (deflated 52%) adding: html/GISTIC-class.html (332 bytes security) (deflated 60%) adding: html/gisticBubblePlot.html (332 bytes security) (deflated 61%) adding: html/gisticChromPlot.html (332 bytes security) (deflated 62%) adding: html/gisticOncoPlot.html (332 bytes security) (deflated 64%) adding: html/icgcSimpleMutationToMAF.html (332 bytes security) (deflated 58%) adding: html/inferHeterogeneity.html (332 bytes security) (deflated 57%) adding: html/lollipopPlot.html (332 bytes security) (deflated 66%) adding: html/MAF-class.html (332 bytes security) (deflated 59%) adding: html/mafCompare.html (332 bytes security) (deflated 59%) adding: html/mafSummary.html (332 bytes security) (deflated 54%) adding: html/mafSurvival.html (332 bytes security) (deflated 63%) adding: html/math.score.html (332 bytes security) (deflated 53%) adding: html/mutCountMatrix.html (332 bytes security) (deflated 57%) adding: html/oncodrive.html (332 bytes security) (deflated 56%) adding: html/oncoplot.html (332 bytes security) (deflated 69%) adding: html/oncostrip.html (332 bytes security) (deflated 65%) adding: html/oncotate.html (332 bytes security) (deflated 52%) adding: html/pancanComparison.html (332 bytes security) (deflated 60%) adding: html/pfamDomains.html (332 bytes security) (deflated 60%) adding: html/plotApobecDiff.html (332 bytes security) (deflated 59%) adding: html/plotCBSsegments.html (332 bytes security) (deflated 61%) adding: html/plotClusters.html (332 bytes security) (deflated 60%) adding: html/plotmafSummary.html (332 bytes security) (deflated 65%) adding: html/plotOncodrive.html (332 bytes security) (deflated 55%) adding: html/plotSignatures.html (332 bytes security) (deflated 62%) adding: html/plotTiTv.html (332 bytes security) (deflated 60%) adding: html/plotVaf.html (332 bytes security) (deflated 60%) adding: html/prepareMutSig.html (332 bytes security) (deflated 52%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/rainfallPlot.html (332 bytes security) (deflated 59%) adding: html/read.maf.html (332 bytes security) (deflated 61%) adding: html/readGistic.html (332 bytes security) (deflated 63%) adding: html/somaticInteractions.html (332 bytes security) (deflated 58%) adding: html/subsetMaf.html (332 bytes security) (deflated 59%) adding: html/tcgaCompare.html (332 bytes security) (deflated 59%) adding: html/titv.html (332 bytes security) (deflated 55%) adding: html/trinucleotideMatrix.html (332 bytes security) (deflated 58%) adding: html/write.GisticSummary.html (332 bytes security) (deflated 59%) adding: html/write.mafSummary.html (332 bytes security) (deflated 55%) adding: INDEX (332 bytes security) (deflated 65%) adding: LICENSE (332 bytes security) (stored 0%) adding: MD5 (332 bytes security) (deflated 47%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 63%) adding: NEWS (332 bytes security) (deflated 60%) adding: R/ (372 bytes security) (stored 0%) adding: R/maftools (332 bytes security) (deflated 41%) adding: R/maftools.rdb (332 bytes security) (deflated 16%) adding: R/maftools.rdx (332 bytes security) (stored 0%)