Pan Du
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/lumi |
| Branch: RELEASE_3_6 |
| Last Commit: de64da0 |
| Last Changed Date: 2017-10-30 12:39:19 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:18:32 -0400 (Thu, 12 Apr 2018).
| Package 763/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| lumi 2.30.0 Pan Du
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: lumi |
| Version: 2.30.0 |
| Command: cd lumi.buildbin-libdir/lumi && zip -r ../../lumi_2.30.0.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:48:34 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:49:09 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 35.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: lumi_2.30.0.zip |
| PackageFileSize: 8.378 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd lumi.buildbin-libdir/lumi && zip -r ../../lumi_2.30.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 72%) adding: data/ (372 bytes security) (stored 0%) adding: data/datalist (332 bytes security) (deflated 31%) adding: data/example.lumi.rda (332 bytes security) (deflated 0%) adding: data/example.lumiMethy.rda (332 bytes security) (deflated 0%) adding: data/example.methyTitration.rda (332 bytes security) (deflated 0%) adding: DESCRIPTION (332 bytes security) (deflated 44%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 77%) adding: help/lumi.rdb (332 bytes security) (deflated 2%) adding: help/lumi.rdx (332 bytes security) (deflated 1%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 85%) adding: html/addAnnotationInfo.html (332 bytes security) (deflated 61%) adding: html/addControlData2lumi.html (332 bytes security) (deflated 57%) adding: html/addControlData2methyLumiM.html (332 bytes security) (deflated 59%) adding: html/addNuID2lumi.html (332 bytes security) (deflated 58%) adding: html/adjColorBias.quantile.html (332 bytes security) (deflated 65%) adding: html/adjColorBias.ssn.html (332 bytes security) (deflated 61%) adding: html/asBigMatrix-methods.html (332 bytes security) (deflated 61%) adding: html/beta2m.html (332 bytes security) (deflated 52%) adding: html/bgAdjust.html (332 bytes security) (deflated 57%) adding: html/bgAdjustMethylation.html (332 bytes security) (deflated 59%) adding: html/boxplot-methods.html (332 bytes security) (deflated 61%) adding: html/boxplot-MethyLumiM-methods.html (332 bytes security) (deflated 58%) adding: html/boxplotColorBias.html (332 bytes security) (deflated 64%) adding: html/colorBiasSummary.html (332 bytes security) (deflated 58%) adding: html/density-methods.html (332 bytes security) (deflated 67%) adding: html/detectionCall.html (332 bytes security) (deflated 57%) adding: html/detectOutlier.html (332 bytes security) (deflated 57%) adding: html/estimateBeta.html (332 bytes security) (deflated 62%) adding: html/estimateIntensity.html (332 bytes security) (deflated 59%) adding: html/estimateLumiCV.html (332 bytes security) (deflated 59%) adding: html/estimateM.html (332 bytes security) (deflated 59%) adding: html/estimateMethylationBG.html (332 bytes security) (deflated 59%) adding: html/example.lumi.html (332 bytes security) (deflated 49%) adding: html/example.lumiMethy.html (332 bytes security) (deflated 51%) adding: html/example.methyTitration.html (332 bytes security) (deflated 51%) adding: html/gammaFitEM.html (332 bytes security) (deflated 65%) adding: html/getChipInfo.html (332 bytes security) (deflated 67%) adding: html/getChrInfo.html (332 bytes security) (deflated 54%) adding: html/getControlData.html (332 bytes security) (deflated 56%) adding: html/getControlProbe.html (332 bytes security) (deflated 54%) adding: html/getControlType.html (332 bytes security) (deflated 54%) adding: html/getNuIDMappingInfo.html (332 bytes security) (deflated 54%) adding: html/hist-methods.html (332 bytes security) (deflated 55%) adding: html/id2seq.html (332 bytes security) (deflated 50%) adding: html/IlluminaID2nuID.html (332 bytes security) (deflated 61%) adding: html/importMethyIDAT.html (332 bytes security) (deflated 62%) adding: html/inverseVST.html (332 bytes security) (deflated 58%) adding: html/is.nuID.html (332 bytes security) (deflated 48%) adding: html/lumi.package.html (332 bytes security) (deflated 57%) adding: html/lumiB.html (332 bytes security) (deflated 58%) adding: html/LumiBatch-class.html (332 bytes security) (deflated 70%) adding: html/lumiExpresso.html (332 bytes security) (deflated 67%) adding: html/lumiMethyB.html (332 bytes security) (deflated 59%) adding: html/lumiMethyC.html (332 bytes security) (deflated 61%) adding: html/lumiMethyN.html (332 bytes security) (deflated 59%) adding: html/lumiMethyR.html (332 bytes security) (deflated 67%) adding: html/lumiMethyStatus.html (332 bytes security) (deflated 60%) adding: html/lumiN.html (332 bytes security) (deflated 62%) adding: html/lumiQ.html (332 bytes security) (deflated 57%) adding: html/lumiR.batch.html (332 bytes security) (deflated 61%) adding: html/lumiR.html (332 bytes security) (deflated 65%) adding: html/lumiT.html (332 bytes security) (deflated 58%) adding: html/m2beta.html (332 bytes security) (deflated 51%) adding: html/MAplot-methods.html (332 bytes security) (deflated 59%) adding: html/methylationCall.html (332 bytes security) (deflated 59%) adding: html/monoSmu.html (332 bytes security) (deflated 60%) adding: html/monoSpline.html (332 bytes security) (deflated 55%) adding: html/normalizeMethylation.quantile.html (332 bytes security) (deflated 59%) adding: html/normalizeMethylation.ssn.html (332 bytes security) (deflated 56%) adding: html/nuID2EntrezID.html (332 bytes security) (deflated 57%) adding: html/nuID2IlluminaID.html (332 bytes security) (deflated 61%) adding: html/nuID2probeID.html (332 bytes security) (deflated 57%) adding: html/nuID2RefSeqID.html (332 bytes security) (deflated 57%) adding: html/nuID2targetID.html (332 bytes security) (deflated 57%) adding: html/pairs-methods.html (332 bytes security) (deflated 63%) adding: html/plot-methods.html (332 bytes security) (deflated 66%) adding: html/plotCDF.html (332 bytes security) (deflated 66%) adding: html/plotColorBias1D.html (332 bytes security) (deflated 61%) adding: html/plotColorBias2D.html (332 bytes security) (deflated 62%) adding: html/plotControlData.html (332 bytes security) (deflated 59%) adding: html/plotDensity.html (332 bytes security) (deflated 58%) adding: html/plotGammaFit.html (332 bytes security) (deflated 62%) adding: html/plotHousekeepingGene.html (332 bytes security) (deflated 58%) adding: html/plotSampleRelation.html (332 bytes security) (deflated 62%) adding: html/plotStringencyGene.html (332 bytes security) (deflated 58%) adding: html/plotVST.html (332 bytes security) (deflated 57%) adding: html/probeID2nuID.html (332 bytes security) (deflated 57%) adding: html/produceGEOPlatformFile.html (332 bytes security) (deflated 58%) adding: html/produceGEOSampleInfoTemplate.html (332 bytes security) (deflated 58%) adding: html/produceGEOSubmissionFile.html (332 bytes security) (deflated 66%) adding: html/produceMethylationGEOSubmissionFile.html (332 bytes security) (deflated 66%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/rankinvariant.html (332 bytes security) (deflated 58%) adding: html/rsn.html (332 bytes security) (deflated 58%) adding: html/seq2id.html (332 bytes security) (deflated 49%) adding: html/smoothQuantileNormalization.html (332 bytes security) (deflated 62%) adding: html/ssn.html (332 bytes security) (deflated 62%) adding: html/targetID2nuID.html (332 bytes security) (deflated 58%) adding: html/vst.html (332 bytes security) (deflated 60%) adding: INDEX (332 bytes security) (deflated 75%) adding: MD5 (332 bytes security) (deflated 50%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 63%) adding: NEWS (332 bytes security) (deflated 71%) adding: R/ (372 bytes security) (stored 0%) adding: R/lumi (332 bytes security) (deflated 41%) adding: R/lumi.rdb (332 bytes security) (deflated 29%) adding: R/lumi.rdx (332 bytes security) (stored 0%)