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INSTALL report for gtrellis on tokay1

This page was generated on 2018-04-12 13:25:57 -0400 (Thu, 12 Apr 2018).

Package 630/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gtrellis 1.11.1
Zuguang Gu
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/gtrellis
Branch: RELEASE_3_6
Last Commit: ff47d99
Last Changed Date: 2018-04-10 08:14:43 -0400 (Tue, 10 Apr 2018)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: gtrellis
Version: 1.11.1
Command: rm -rf gtrellis.buildbin-libdir && mkdir gtrellis.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/gtrellis_1.11.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=gtrellis.buildbin-libdir --merge-multiarch gtrellis_1.11.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL gtrellis_1.11.1.zip && rm gtrellis_1.11.1.tar.gz gtrellis_1.11.1.zip
StartedAt: 2018-04-11 18:38:04 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:38:45 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 41.1 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf gtrellis.buildbin-libdir && mkdir gtrellis.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/gtrellis_1.11.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=gtrellis.buildbin-libdir --merge-multiarch gtrellis_1.11.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL gtrellis_1.11.1.zip  && rm gtrellis_1.11.1.tar.gz gtrellis_1.11.1.zip
###
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100  833k  100  833k    0     0  26.6M      0 --:--:-- --:--:-- --:--:-- 30.1M

install for i386

* installing *source* package 'gtrellis' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'gtrellis'
    finding HTML links ... done
    add_heatmap_track                       html  
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpgns0AB/R.INSTALLa548e053bb/gtrellis/man/add_heatmap_track.rd:14: missing file link 'GRanges'
    add_ideogram_track                      html  
    add_lines_track                         html  
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpgns0AB/R.INSTALLa548e053bb/gtrellis/man/add_lines_track.rd:14: missing file link 'GRanges'
    add_points_track                        html  
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpgns0AB/R.INSTALLa548e053bb/gtrellis/man/add_points_track.rd:14: missing file link 'GRanges'
    add_rect_track                          html  
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpgns0AB/R.INSTALLa548e053bb/gtrellis/man/add_rect_track.rd:14: missing file link 'GRanges'
    add_segments_track                      html  
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpgns0AB/R.INSTALLa548e053bb/gtrellis/man/add_segments_track.rd:14: missing file link 'GRanges'
    add_track                               html  
    current_track                           html  
    get_cell_meta_data                      html  
    gtrellis_layout                         html  
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpgns0AB/R.INSTALLa548e053bb/gtrellis/man/gtrellis_layout.rd:44: missing file link 'I'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpgns0AB/R.INSTALLa548e053bb/gtrellis/man/gtrellis_layout.rd:57: missing file link 'grob'
    gtrellis_show_index                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'gtrellis' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'gtrellis' as gtrellis_1.11.1.zip
* DONE (gtrellis)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'gtrellis' successfully unpacked and MD5 sums checked
In R CMD INSTALL