Altuna Akalin
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/genomation |
| Branch: RELEASE_3_6 |
| Last Commit: 59413a6 |
| Last Changed Date: 2018-01-24 09:47:01 -0400 (Wed, 24 Jan 2018) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:25:26 -0400 (Thu, 12 Apr 2018).
| Package 557/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| genomation 1.11.3 Altuna Akalin
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: genomation |
| Version: 1.11.3 |
| Command: cd genomation.buildbin-libdir/genomation && zip -r ../../genomation_1.11.3.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:41:35 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:42:12 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 37.3 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: genomation_1.11.3.zip |
| PackageFileSize: 6.398 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd genomation.buildbin-libdir/genomation && zip -r ../../genomation_1.11.3.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 51%) adding: data/ (372 bytes security) (stored 0%) adding: data/cage.RData (332 bytes security) (deflated 0%) adding: data/cpgi.RData (332 bytes security) (stored 0%) adding: data/genes.RData (332 bytes security) (stored 0%) adding: data/promoters.RData (332 bytes security) (stored 0%) adding: DESCRIPTION (332 bytes security) (deflated 48%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/GenomationManual.html (332 bytes security) (deflated 42%) adding: doc/GenomationManual.R (332 bytes security) (deflated 79%) adding: doc/GenomationManual.Rmd (332 bytes security) (deflated 70%) adding: doc/index.html (332 bytes security) (deflated 60%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/chr21.CpGi.hg19.bed (332 bytes security) (deflated 67%) adding: extdata/chr21.refseq.hg19.bed (332 bytes security) (deflated 71%) adding: extdata/chr21.refseq.hg19.gtf (332 bytes security) (deflated 94%) adding: extdata/EnhancersEncode.txt.Test (332 bytes security) (deflated 53%) adding: extdata/ex.broadPeak (332 bytes security) (deflated 38%) adding: extdata/ex.narrowPeak (332 bytes security) (deflated 40%) adding: extdata/Fantom4.Cage.Test (332 bytes security) (deflated 63%) adding: extdata/tab1.bed (332 bytes security) (deflated 40%) adding: extdata/tab2.bed (332 bytes security) (deflated 43%) adding: extdata/tab3.bed (332 bytes security) (deflated 46%) adding: genomation_logo.png (332 bytes security) (deflated 1%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 83%) adding: help/genomation.rdb (332 bytes security) (deflated 2%) adding: help/genomation.rdx (332 bytes security) (deflated 1%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 85%) adding: html/annotateWithFeature-methods.html (332 bytes security) (deflated 59%) adding: html/annotateWithFeatureFlank-methods.html (332 bytes security) (deflated 62%) adding: html/annotateWithFeatures-methods.html (332 bytes security) (deflated 59%) adding: html/annotateWithGeneParts-methods.html (332 bytes security) (deflated 60%) adding: html/annotatGrWithGeneParts.html (332 bytes security) (deflated 56%) adding: html/AnnotationByFeature-class.html (332 bytes security) (deflated 58%) adding: html/AnnotationByGeneParts-class.html (332 bytes security) (deflated 57%) adding: html/AnnotationByGeneParts-methods.html (332 bytes security) (deflated 50%) adding: html/bed12ToExons.html (332 bytes security) (deflated 44%) adding: html/bed12ToIntrons.html (332 bytes security) (deflated 45%) adding: html/binMatrix-methods.html (332 bytes security) (deflated 59%) adding: html/binMax.html (332 bytes security) (deflated 49%) adding: html/binMean.html (332 bytes security) (deflated 49%) adding: html/binMedian.html (332 bytes security) (deflated 50%) adding: html/binMin.html (332 bytes security) (deflated 49%) adding: html/binner.html (332 bytes security) (deflated 49%) adding: html/binSum.html (332 bytes security) (deflated 50%) adding: html/c.ScoreMatrix.html (332 bytes security) (deflated 52%) adding: html/c.ScoreMatrixList.html (332 bytes security) (deflated 52%) adding: html/cage.html (332 bytes security) (deflated 41%) adding: html/calculateOverlapSignificance-methods.html (332 bytes security) (deflated 63%) adding: html/checkBedValidity.html (332 bytes security) (deflated 48%) adding: html/checkClass.html (332 bytes security) (deflated 50%) adding: html/compressedAndUrl2temp.html (332 bytes security) (deflated 48%) adding: html/constrainRanges.html (332 bytes security) (deflated 48%) adding: html/convertBed2Exons-methods.html (332 bytes security) (deflated 51%) adding: html/convertBed2Introns-methods.html (332 bytes security) (deflated 52%) adding: html/convertBedDf-methods.html (332 bytes security) (deflated 50%) adding: html/cpgi.html (332 bytes security) (deflated 42%) adding: html/detectUCSCheader.html (332 bytes security) (deflated 46%) adding: html/distance2NearestFeature.html (332 bytes security) (deflated 50%) adding: html/enrichmentMatrix-ScoreMatrix-method.html (332 bytes security) (deflated 59%) adding: html/enrichmentMatrix-ScoreMatrixList-method.html (332 bytes security) (deflated 63%) adding: html/enrichmentMatrix-ScoreMatrixList-ScoreMatrix-method.html (332 bytes security) (deflated 63%) adding: html/file.ext.html (332 bytes security) (deflated 44%) adding: html/findFeatureComb-methods.html (332 bytes security) (deflated 54%) adding: html/galpTo2Ranges.html (332 bytes security) (deflated 46%) adding: html/genes.html (332 bytes security) (deflated 42%) adding: html/getColors.html (332 bytes security) (deflated 44%) adding: html/getFeatsWithTargetsStats-methods.html (332 bytes security) (deflated 56%) adding: html/getFlanks-methods.html (332 bytes security) (deflated 55%) adding: html/getMembers-methods.html (332 bytes security) (deflated 50%) adding: html/getRandomEnrichment-methods.html (332 bytes security) (deflated 60%) adding: html/getTargetAnnotationStats-methods.html (332 bytes security) (deflated 57%) adding: html/gffToGRanges.html (332 bytes security) (deflated 57%) adding: html/heatMatrix.html (332 bytes security) (deflated 67%) adding: html/heatMeta.html (332 bytes security) (deflated 62%) adding: html/heatTargetAnnotation-methods.html (332 bytes security) (deflated 58%) adding: html/intersectScoreMatrixList-methods.html (332 bytes security) (deflated 57%) adding: html/listSliceMax.html (332 bytes security) (deflated 49%) adding: html/listSliceMean.html (332 bytes security) (deflated 49%) adding: html/listSliceMedian.html (332 bytes security) (deflated 49%) adding: html/listSliceMin.html (332 bytes security) (deflated 49%) adding: html/listSliceSum.html (332 bytes security) (deflated 49%) adding: html/Max_c.html (332 bytes security) (deflated 45%) adding: html/Mean_c.html (332 bytes security) (deflated 45%) adding: html/Median_c.html (332 bytes security) (deflated 46%) adding: html/Min_c.html (332 bytes security) (deflated 45%) adding: html/multiHeatMatrix.html (332 bytes security) (deflated 68%) adding: html/Ops-numeric-ScoreMatrixList-method.html (332 bytes security) (deflated 53%) adding: html/Ops-ScoreMatrix-ScoreMatrix-method.html (332 bytes security) (deflated 56%) adding: html/Ops-ScoreMatrixList-numeric-method.html (332 bytes security) (deflated 53%) adding: html/Ops-ScoreMatrixList-ScoreMatrixList-method.html (332 bytes security) (deflated 56%) adding: html/orderBy-methods.html (332 bytes security) (deflated 53%) adding: html/patternMatrix-methods.html (332 bytes security) (deflated 65%) adding: html/plotMeta.html (332 bytes security) (deflated 63%) adding: html/plotTargetAnnotation-methods.html (332 bytes security) (deflated 57%) adding: html/promoters.html (332 bytes security) (deflated 43%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/RandomEnrichment-class.html (332 bytes security) (deflated 57%) adding: html/randomizeFeature-methods.html (332 bytes security) (deflated 61%) adding: html/read.zip.html (332 bytes security) (deflated 47%) adding: html/readBam.html (332 bytes security) (deflated 59%) adding: html/readBed.html (332 bytes security) (deflated 55%) adding: html/readBigWig.html (332 bytes security) (deflated 49%) adding: html/readBroadPeak.html (332 bytes security) (deflated 55%) adding: html/readFeatureFlank-methods.html (332 bytes security) (deflated 57%) adding: html/readGeneric.html (332 bytes security) (deflated 62%) adding: html/readNarrowPeak.html (332 bytes security) (deflated 55%) adding: html/readTableFast.html (332 bytes security) (deflated 54%) adding: html/readTranscriptFeatures-methods.html (332 bytes security) (deflated 59%) adding: html/scaleScoreMatrix-methods.html (332 bytes security) (deflated 60%) adding: html/scaleScoreMatrixList.html (332 bytes security) (deflated 57%) adding: html/ScoreMatrix-class.html (332 bytes security) (deflated 53%) adding: html/ScoreMatrix-methods.html (332 bytes security) (deflated 63%) adding: html/ScoreMatrixBin-methods.html (332 bytes security) (deflated 68%) adding: html/ScoreMatrixList-class.html (332 bytes security) (deflated 58%) adding: html/ScoreMatrixList-methods.html (332 bytes security) (deflated 62%) adding: html/show-methods.html (332 bytes security) (deflated 56%) adding: html/sub-ScoreMatrix-ANY-ANY-ANY-method.html (332 bytes security) (deflated 55%) adding: html/sub-ScoreMatrixList-ANY-ANY-ANY-method.html (332 bytes security) (deflated 53%) adding: html/Sum_c.html (332 bytes security) (deflated 45%) adding: html/target.type.html (332 bytes security) (deflated 48%) adding: INDEX (332 bytes security) (deflated 77%) adding: libs/ (372 bytes security) (stored 0%) adding: libs/i386/ (372 bytes security) (stored 0%) adding: libs/i386/genomation.dll (332 bytes security) (deflated 66%) adding: libs/x64/ (372 bytes security) (stored 0%) adding: libs/x64/genomation.dll (332 bytes security) (deflated 67%) adding: MD5 (332 bytes security) (deflated 53%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (deflated 2%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes 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adding: unitTests/test_ScoreMatrixList.R (332 bytes security) (deflated 82%)